Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RARRES2P4-201ENST00000514074 484 ntBASIC21.05■□□□□ 0.96
CALR3Q96L12 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
CALR3Q96L12 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
CALR3Q96L12 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CALR3Q96L12 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALR3Q96L12 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALR3Q96L12 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALR3Q96L12 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALR3Q96L12 AP000974.1-201ENST00000623909 2387 ntBASIC21.04■□□□□ 0.96
CALR3Q96L12 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALR3Q96L12 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.04■□□□□ 0.96
CALR3Q96L12 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALR3Q96L12 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALR3Q96L12 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CALR3Q96L12 HLA-G-202ENST00000376815 851 ntBASIC21.04■□□□□ 0.96
CALR3Q96L12 HLA-G-203ENST00000376818 1127 ntBASIC21.04■□□□□ 0.96
CALR3Q96L12 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.04■□□□□ 0.96
CALR3Q96L12 ZNRF2P3-201ENST00000424200 374 ntBASIC21.04■□□□□ 0.96
CALR3Q96L12 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CALR3Q96L12 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.04■□□□□ 0.96
CALR3Q96L12 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.04■□□□□ 0.96
CALR3Q96L12 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.04■□□□□ 0.96
CALR3Q96L12 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.04■□□□□ 0.96
CALR3Q96L12 AC016405.3-201ENST00000607710 860 ntBASIC21.04■□□□□ 0.96
CALR3Q96L12 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALR3Q96L12 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CALR3Q96L12 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CALR3Q96L12 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.04■□□□□ 0.96
CALR3Q96L12 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.04■□□□□ 0.96
CALR3Q96L12 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALR3Q96L12 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALR3Q96L12 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CALR3Q96L12 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.03■□□□□ 0.96
CALR3Q96L12 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CALR3Q96L12 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CALR3Q96L12 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CALR3Q96L12 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CALR3Q96L12 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CALR3Q96L12 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CALR3Q96L12 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CALR3Q96L12 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.03■□□□□ 0.96
CALR3Q96L12 MFSD11-216ENST00000590393 1141 ntBASIC21.03■□□□□ 0.96
CALR3Q96L12 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CALR3Q96L12 AC105020.6-201ENST00000621523 1217 ntBASIC21.03■□□□□ 0.96
CALR3Q96L12 TNXA-203ENST00000507684 2038 ntBASIC21.03■□□□□ 0.96
CALR3Q96L12 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CALR3Q96L12 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CALR3Q96L12 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CALR3Q96L12 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.03■□□□□ 0.96
CALR3Q96L12 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CALR3Q96L12 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CALR3Q96L12 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.03■□□□□ 0.96
CALR3Q96L12 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CALR3Q96L12 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CALR3Q96L12 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CALR3Q96L12 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CALR3Q96L12 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CALR3Q96L12 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.02■□□□□ 0.96
CALR3Q96L12 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.02■□□□□ 0.96
CALR3Q96L12 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.02■□□□□ 0.96
CALR3Q96L12 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CALR3Q96L12 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.02■□□□□ 0.96
CALR3Q96L12 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.02■□□□□ 0.96
CALR3Q96L12 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.02■□□□□ 0.96
CALR3Q96L12 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CALR3Q96L12 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.02■□□□□ 0.96
CALR3Q96L12 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.02■□□□□ 0.96
CALR3Q96L12 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CALR3Q96L12 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CALR3Q96L12 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CALR3Q96L12 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CALR3Q96L12 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.01■□□□□ 0.95
CALR3Q96L12 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CALR3Q96L12 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CALR3Q96L12 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CALR3Q96L12 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.01■□□□□ 0.95
CALR3Q96L12 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CALR3Q96L12 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CALR3Q96L12 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CALR3Q96L12 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CALR3Q96L12 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.01■□□□□ 0.95
CALR3Q96L12 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CALR3Q96L12 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CALR3Q96L12 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CALR3Q96L12 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CALR3Q96L12 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.01■□□□□ 0.95
CALR3Q96L12 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.01■□□□□ 0.95
CALR3Q96L12 AC093484.2-201ENST00000580996 2166 ntBASIC21.01■□□□□ 0.95
CALR3Q96L12 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CALR3Q96L12 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CALR3Q96L12 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CALR3Q96L12 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
CALR3Q96L12 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CALR3Q96L12 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21■□□□□ 0.95
CALR3Q96L12 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CALR3Q96L12 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CALR3Q96L12 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CALR3Q96L12 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CALR3Q96L12 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21■□□□□ 0.95
CALR3Q96L12 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms