Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ITCHQ96J02 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ITCHQ96J02 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ITCHQ96J02 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.96■□□□□ 0.63
ITCHQ96J02 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.96■□□□□ 0.63
ITCHQ96J02 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ITCHQ96J02 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ITCHQ96J02 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ITCHQ96J02 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.95■□□□□ 0.62
ITCHQ96J02 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ITCHQ96J02 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ITCHQ96J02 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ITCHQ96J02 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ITCHQ96J02 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ITCHQ96J02 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ITCHQ96J02 AL162412.1-201ENST00000567129 965 ntBASIC18.95■□□□□ 0.62
ITCHQ96J02 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ITCHQ96J02 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ITCHQ96J02 TREX1-205ENST00000625293 1783 ntBASIC18.95■□□□□ 0.62
ITCHQ96J02 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ITCHQ96J02 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.95■□□□□ 0.62
ITCHQ96J02 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ITCHQ96J02 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ITCHQ96J02 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.94■□□□□ 0.62
ITCHQ96J02 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ITCHQ96J02 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ITCHQ96J02 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ITCHQ96J02 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ITCHQ96J02 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.94■□□□□ 0.62
ITCHQ96J02 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.94■□□□□ 0.62
ITCHQ96J02 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.94■□□□□ 0.62
ITCHQ96J02 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ITCHQ96J02 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ITCHQ96J02 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
ITCHQ96J02 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ITCHQ96J02 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ITCHQ96J02 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ITCHQ96J02 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ITCHQ96J02 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ITCHQ96J02 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ITCHQ96J02 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.93■□□□□ 0.62
ITCHQ96J02 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ITCHQ96J02 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ITCHQ96J02 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ITCHQ96J02 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ITCHQ96J02 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ITCHQ96J02 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ITCHQ96J02 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.93■□□□□ 0.62
ITCHQ96J02 ZNRF2P3-201ENST00000424200 374 ntBASIC18.93■□□□□ 0.62
ITCHQ96J02 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.93■□□□□ 0.62
ITCHQ96J02 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ITCHQ96J02 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ITCHQ96J02 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ITCHQ96J02 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ITCHQ96J02 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ITCHQ96J02 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.93■□□□□ 0.62
ITCHQ96J02 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ITCHQ96J02 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ITCHQ96J02 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.93■□□□□ 0.62
ITCHQ96J02 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.93■□□□□ 0.62
ITCHQ96J02 AC009237.14-201ENST00000609975 1594 ntBASIC18.93■□□□□ 0.62
ITCHQ96J02 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ITCHQ96J02 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ITCHQ96J02 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ITCHQ96J02 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
ITCHQ96J02 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.92■□□□□ 0.62
ITCHQ96J02 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ITCHQ96J02 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ITCHQ96J02 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ITCHQ96J02 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ITCHQ96J02 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ITCHQ96J02 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ITCHQ96J02 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.92■□□□□ 0.62
ITCHQ96J02 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.92■□□□□ 0.62
ITCHQ96J02 AC098818.2-201ENST00000564925 2320 ntBASIC18.92■□□□□ 0.62
ITCHQ96J02 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
ITCHQ96J02 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.92■□□□□ 0.62
ITCHQ96J02 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ITCHQ96J02 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ITCHQ96J02 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.92■□□□□ 0.62
ITCHQ96J02 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ITCHQ96J02 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ITCHQ96J02 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ITCHQ96J02 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ITCHQ96J02 AC005332.7-201ENST00000614046 2005 ntBASIC18.91■□□□□ 0.62
ITCHQ96J02 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ITCHQ96J02 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ITCHQ96J02 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ITCHQ96J02 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.91■□□□□ 0.62
ITCHQ96J02 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ITCHQ96J02 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ITCHQ96J02 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ITCHQ96J02 AC007322.4-201ENST00000509611 723 ntBASIC18.91■□□□□ 0.62
ITCHQ96J02 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
ITCHQ96J02 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.91■□□□□ 0.62
ITCHQ96J02 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.91■□□□□ 0.62
ITCHQ96J02 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ITCHQ96J02 NTF6G-201ENST00000591094 616 ntBASIC18.91■□□□□ 0.62
ITCHQ96J02 AC013268.1-206ENST00000638368 961 ntBASIC18.91■□□□□ 0.62
ITCHQ96J02 AC112229.1-201ENST00000639295 961 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms