Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX11Q96FC9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
DDX11Q96FC9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.64■■□□□ 1.38
DDX11Q96FC9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
DDX11Q96FC9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.64■■□□□ 1.38
DDX11Q96FC9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.64■■□□□ 1.38
DDX11Q96FC9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
DDX11Q96FC9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.64■■□□□ 1.37
DDX11Q96FC9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.64■■□□□ 1.37
DDX11Q96FC9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.64■■□□□ 1.37
DDX11Q96FC9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.64■■□□□ 1.37
DDX11Q96FC9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX11Q96FC9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX11Q96FC9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.64■■□□□ 1.37
DDX11Q96FC9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.64■■□□□ 1.37
DDX11Q96FC9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX11Q96FC9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX11Q96FC9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
DDX11Q96FC9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX11Q96FC9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX11Q96FC9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX11Q96FC9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
DDX11Q96FC9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
DDX11Q96FC9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX11Q96FC9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.63■■□□□ 1.37
DDX11Q96FC9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.63■■□□□ 1.37
DDX11Q96FC9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX11Q96FC9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.63■■□□□ 1.37
DDX11Q96FC9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
DDX11Q96FC9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.63■■□□□ 1.37
DDX11Q96FC9 AC008403.3-201ENST00000598924 454 ntBASIC23.63■■□□□ 1.37
DDX11Q96FC9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.63■■□□□ 1.37
DDX11Q96FC9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX11Q96FC9 DPP3P2-201ENST00000416030 1696 ntBASIC23.63■■□□□ 1.37
DDX11Q96FC9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX11Q96FC9 CYP21A1P-202ENST00000354927 1481 ntBASIC23.62■■□□□ 1.37
DDX11Q96FC9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
DDX11Q96FC9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX11Q96FC9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX11Q96FC9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
DDX11Q96FC9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.62■■□□□ 1.37
DDX11Q96FC9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
DDX11Q96FC9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX11Q96FC9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX11Q96FC9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
DDX11Q96FC9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
DDX11Q96FC9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
DDX11Q96FC9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.62■■□□□ 1.37
DDX11Q96FC9 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.62■■□□□ 1.37
DDX11Q96FC9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.62■■□□□ 1.37
DDX11Q96FC9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
DDX11Q96FC9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
DDX11Q96FC9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
DDX11Q96FC9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
DDX11Q96FC9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX11Q96FC9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.62■■□□□ 1.37
DDX11Q96FC9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX11Q96FC9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
DDX11Q96FC9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX11Q96FC9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
DDX11Q96FC9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
DDX11Q96FC9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.62■■□□□ 1.37
DDX11Q96FC9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX11Q96FC9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.61■■□□□ 1.37
DDX11Q96FC9 AC092368.3-202ENST00000574180 1591 ntBASIC23.61■■□□□ 1.37
DDX11Q96FC9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.61■■□□□ 1.37
DDX11Q96FC9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
DDX11Q96FC9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX11Q96FC9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.61■■□□□ 1.37
DDX11Q96FC9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
DDX11Q96FC9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX11Q96FC9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.61■■□□□ 1.37
DDX11Q96FC9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.61■■□□□ 1.37
DDX11Q96FC9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX11Q96FC9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.61■■□□□ 1.37
DDX11Q96FC9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.61■■□□□ 1.37
DDX11Q96FC9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
DDX11Q96FC9 PNMA6B-201ENST00000538162 1200 ntBASIC23.61■■□□□ 1.37
DDX11Q96FC9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX11Q96FC9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.61■■□□□ 1.37
DDX11Q96FC9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
DDX11Q96FC9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX11Q96FC9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX11Q96FC9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX11Q96FC9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.61■■□□□ 1.37
DDX11Q96FC9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX11Q96FC9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX11Q96FC9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.6■■□□□ 1.37
DDX11Q96FC9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX11Q96FC9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX11Q96FC9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX11Q96FC9 UNC93B4-201ENST00000505679 747 ntBASIC23.6■■□□□ 1.37
DDX11Q96FC9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.6■■□□□ 1.37
DDX11Q96FC9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.6■■□□□ 1.37
DDX11Q96FC9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.6■■□□□ 1.37
DDX11Q96FC9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
DDX11Q96FC9 AL356652.1-201ENST00000615962 565 ntBASIC23.6■■□□□ 1.37
DDX11Q96FC9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX11Q96FC9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
DDX11Q96FC9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms