Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A3Q93084 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A3Q93084 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A3Q93084 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A3Q93084 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A3Q93084 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
ATP2A3Q93084 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.96■□□□□ 0.95
ATP2A3Q93084 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP2A3Q93084 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP2A3Q93084 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ATP2A3Q93084 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A3Q93084 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A3Q93084 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A3Q93084 PLK5-205ENST00000642079 1969 ntBASIC20.96■□□□□ 0.95
ATP2A3Q93084 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
ATP2A3Q93084 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
ATP2A3Q93084 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A3Q93084 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A3Q93084 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A3Q93084 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ATP2A3Q93084 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
ATP2A3Q93084 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP2A3Q93084 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A3Q93084 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP2A3Q93084 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A3Q93084 AC120498.8-201ENST00000614275 531 ntBASIC20.95■□□□□ 0.94
ATP2A3Q93084 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ATP2A3Q93084 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP2A3Q93084 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP2A3Q93084 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A3Q93084 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A3Q93084 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ATP2A3Q93084 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A3Q93084 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
ATP2A3Q93084 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A3Q93084 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A3Q93084 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP2A3Q93084 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 AC011484.1-201ENST00000377652 1995 ntBASIC20.94■□□□□ 0.94
ATP2A3Q93084 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ATP2A3Q93084 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ATP2A3Q93084 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP2A3Q93084 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP2A3Q93084 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP2A3Q93084 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP2A3Q93084 MTDHP1-201ENST00000605323 784 ntBASIC20.94■□□□□ 0.94
ATP2A3Q93084 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ATP2A3Q93084 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.94■□□□□ 0.94
ATP2A3Q93084 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP2A3Q93084 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A3Q93084 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A3Q93084 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A3Q93084 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A3Q93084 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A3Q93084 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A3Q93084 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.93■□□□□ 0.94
ATP2A3Q93084 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A3Q93084 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ATP2A3Q93084 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A3Q93084 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.93■□□□□ 0.94
ATP2A3Q93084 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A3Q93084 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A3Q93084 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A3Q93084 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.93■□□□□ 0.94
ATP2A3Q93084 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.93■□□□□ 0.94
ATP2A3Q93084 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ATP2A3Q93084 AC006557.6-201ENST00000623071 864 ntBASIC20.93■□□□□ 0.94
ATP2A3Q93084 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
ATP2A3Q93084 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP2A3Q93084 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A3Q93084 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A3Q93084 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP2A3Q93084 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.93■□□□□ 0.94
ATP2A3Q93084 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A3Q93084 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A3Q93084 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ATP2A3Q93084 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
ATP2A3Q93084 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms