Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 AC093827.2-201ENST00000512654 315 ntBASIC23.53■■□□□ 1.36
STAG1Q8WVM7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.53■■□□□ 1.36
STAG1Q8WVM7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
STAG1Q8WVM7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 RN7SL471P-201ENST00000580476 299 ntBASIC23.51■■□□□ 1.35
STAG1Q8WVM7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 MTDHP1-201ENST00000605323 784 ntBASIC23.51■■□□□ 1.35
STAG1Q8WVM7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 AL121829.2-201ENST00000620908 328 ntBASIC23.51■■□□□ 1.35
STAG1Q8WVM7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
STAG1Q8WVM7 AL691432.2-201ENST00000607222 2038 ntBASIC23.5■■□□□ 1.35
STAG1Q8WVM7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
STAG1Q8WVM7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
STAG1Q8WVM7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
STAG1Q8WVM7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.5■■□□□ 1.35
STAG1Q8WVM7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
STAG1Q8WVM7 AL121906.2-201ENST00000621597 723 ntBASIC23.5■■□□□ 1.35
STAG1Q8WVM7 AL359736.2-201ENST00000621992 437 ntBASIC23.5■■□□□ 1.35
STAG1Q8WVM7 AP006294.2-201ENST00000641667 209 ntBASIC23.5■■□□□ 1.35
STAG1Q8WVM7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.5■■□□□ 1.35
STAG1Q8WVM7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
STAG1Q8WVM7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.5■■□□□ 1.35
STAG1Q8WVM7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
STAG1Q8WVM7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
STAG1Q8WVM7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.5■■□□□ 1.35
STAG1Q8WVM7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
STAG1Q8WVM7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
STAG1Q8WVM7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
STAG1Q8WVM7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.49■■□□□ 1.35
STAG1Q8WVM7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
STAG1Q8WVM7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
STAG1Q8WVM7 AC116351.2-201ENST00000606540 1585 ntBASIC23.49■■□□□ 1.35
STAG1Q8WVM7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.49■■□□□ 1.35
STAG1Q8WVM7 PHGDH-210ENST00000641115 1638 ntBASIC23.49■■□□□ 1.35
STAG1Q8WVM7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.49■■□□□ 1.35
STAG1Q8WVM7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
STAG1Q8WVM7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
STAG1Q8WVM7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
STAG1Q8WVM7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
STAG1Q8WVM7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.49■■□□□ 1.35
STAG1Q8WVM7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
STAG1Q8WVM7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
STAG1Q8WVM7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
STAG1Q8WVM7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms