Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 AC005181.1-201ENST00000604782 1256 ntBASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 TNXA-203ENST00000507684 2038 ntBASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP61Q8NHU2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 CYP2T1P-201ENST00000432607 1285 ntBASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 AC008694.1-202ENST00000636953 945 ntBASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 LETM1P2-201ENST00000597330 2178 ntBASIC20.1■□□□□ 0.81
CFAP61Q8NHU2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 FP700111.2-201ENST00000619190 1892 ntBASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 MIR663A-201ENST00000385250 93 ntBASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CFAP61Q8NHU2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
CFAP61Q8NHU2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CFAP61Q8NHU2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
CFAP61Q8NHU2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CFAP61Q8NHU2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.08■□□□□ 0.81
CFAP61Q8NHU2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CFAP61Q8NHU2 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.08■□□□□ 0.81
CFAP61Q8NHU2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CFAP61Q8NHU2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.08■□□□□ 0.81
CFAP61Q8NHU2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CFAP61Q8NHU2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.08■□□□□ 0.8
CFAP61Q8NHU2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CFAP61Q8NHU2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CFAP61Q8NHU2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CFAP61Q8NHU2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms