Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CLDND2Q8NHS1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 AC008550.1-201ENST00000511500 884 ntBASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 AC005829.2-201ENST00000571422 1056 ntBASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 AC006557.6-201ENST00000623071 864 ntBASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDND2Q8NHS1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.89■□□□□ 0.3
CLDND2Q8NHS1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.89■□□□□ 0.3
CLDND2Q8NHS1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLDND2Q8NHS1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CLDND2Q8NHS1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 AL596275.1-201ENST00000423464 877 ntBASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms