Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 NBPF21P-201ENST00000425093 1451 ntBASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 AC007375.3-201ENST00000600936 2314 ntBASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 AL137013.1-201ENST00000432946 1228 ntBASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 NUDT16P1-203ENST00000513809 620 ntBASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 AL031963.3-201ENST00000606441 850 ntBASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
ZNF248Q8NDW4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 KRT18P22-201ENST00000402024 1347 ntBASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 Z98882.1-201ENST00000622160 2253 ntBASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 KRT18P57-201ENST00000443599 1254 ntBASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 NAPSB-206ENST00000562112 1266 ntBASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.06■□□□□ 0.64
ZNF248Q8NDW4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 MIR1238-201ENST00000408483 83 ntBASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 AP000525.1-201ENST00000608286 694 ntBASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF248Q8NDW4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF248Q8NDW4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF248Q8NDW4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.04■□□□□ 0.64
ZNF248Q8NDW4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.04■□□□□ 0.64
ZNF248Q8NDW4 AC079598.2-202ENST00000546624 1451 ntBASIC19.04■□□□□ 0.64
ZNF248Q8NDW4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNF248Q8NDW4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ZNF248Q8NDW4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF248Q8NDW4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.04■□□□□ 0.64
ZNF248Q8NDW4 AC004264.1-201ENST00000608354 794 ntBASIC19.04■□□□□ 0.64
ZNF248Q8NDW4 REXO1L10P-201ENST00000615707 1290 ntBASIC19.04■□□□□ 0.64
ZNF248Q8NDW4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF248Q8NDW4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.04■□□□□ 0.64
ZNF248Q8NDW4 AC026310.3-201ENST00000625186 2373 ntBASIC19.04■□□□□ 0.64
ZNF248Q8NDW4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 KRT8P9-201ENST00000558927 1449 ntBASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms