Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD1Q8N668 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.5■□□□□ 0.23
COMMD1Q8N668 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
COMMD1Q8N668 MFSD11-216ENST00000590393 1141 ntBASIC16.5■□□□□ 0.23
COMMD1Q8N668 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.5■□□□□ 0.23
COMMD1Q8N668 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.5■□□□□ 0.23
COMMD1Q8N668 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.5■□□□□ 0.23
COMMD1Q8N668 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD1Q8N668 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
COMMD1Q8N668 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD1Q8N668 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD1Q8N668 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
COMMD1Q8N668 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD1Q8N668 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
COMMD1Q8N668 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
COMMD1Q8N668 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
COMMD1Q8N668 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.49■□□□□ 0.23
COMMD1Q8N668 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 KRT16P2-201ENST00000414673 1423 ntBASIC16.49■□□□□ 0.23
COMMD1Q8N668 CDCA4P2-201ENST00000441182 718 ntBASIC16.49■□□□□ 0.23
COMMD1Q8N668 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.49■□□□□ 0.23
COMMD1Q8N668 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.49■□□□□ 0.23
COMMD1Q8N668 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.49■□□□□ 0.23
COMMD1Q8N668 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.49■□□□□ 0.23
COMMD1Q8N668 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 AC121338.2-201ENST00000622535 1744 ntBASIC16.49■□□□□ 0.23
COMMD1Q8N668 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.49■□□□□ 0.23
COMMD1Q8N668 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD1Q8N668 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.49■□□□□ 0.23
COMMD1Q8N668 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD1Q8N668 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.48■□□□□ 0.23
COMMD1Q8N668 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
COMMD1Q8N668 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.48■□□□□ 0.23
COMMD1Q8N668 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
COMMD1Q8N668 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD1Q8N668 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
COMMD1Q8N668 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.48■□□□□ 0.23
COMMD1Q8N668 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD1Q8N668 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD1Q8N668 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.48■□□□□ 0.23
COMMD1Q8N668 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.48■□□□□ 0.23
COMMD1Q8N668 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.48■□□□□ 0.23
COMMD1Q8N668 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD1Q8N668 TCF3P1-201ENST00000423021 1937 ntBASIC16.48■□□□□ 0.23
COMMD1Q8N668 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD1Q8N668 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD1Q8N668 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
COMMD1Q8N668 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
COMMD1Q8N668 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
COMMD1Q8N668 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD1Q8N668 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.48■□□□□ 0.23
COMMD1Q8N668 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD1Q8N668 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD1Q8N668 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD1Q8N668 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.47■□□□□ 0.23
COMMD1Q8N668 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD1Q8N668 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD1Q8N668 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD1Q8N668 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.47■□□□□ 0.23
COMMD1Q8N668 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD1Q8N668 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.47■□□□□ 0.23
COMMD1Q8N668 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
COMMD1Q8N668 AC007322.1-201ENST00000426983 750 ntBASIC16.47■□□□□ 0.23
COMMD1Q8N668 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.47■□□□□ 0.23
COMMD1Q8N668 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.47■□□□□ 0.23
COMMD1Q8N668 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
COMMD1Q8N668 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD1Q8N668 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD1Q8N668 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD1Q8N668 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.47■□□□□ 0.23
COMMD1Q8N668 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD1Q8N668 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD1Q8N668 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD1Q8N668 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD1Q8N668 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD1Q8N668 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD1Q8N668 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD1Q8N668 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COMMD1Q8N668 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD1Q8N668 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD1Q8N668 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD1Q8N668 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD1Q8N668 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD1Q8N668 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD1Q8N668 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD1Q8N668 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD1Q8N668 AC006970.2-201ENST00000450065 779 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms