Protein–RNA interactions for Protein: Q7Z4N2

TRPM1, Transient receptor potential cation channel subfamily M member 1, humanhuman

Predictions only

Length 1,603 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1Q7Z4N2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
TRPM1Q7Z4N2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC28.12■■■□□ 2.09
TRPM1Q7Z4N2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
TRPM1Q7Z4N2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TRPM1Q7Z4N2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM1Q7Z4N2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRPM1Q7Z4N2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC28.1■■■□□ 2.09
TRPM1Q7Z4N2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC28.1■■■□□ 2.09
TRPM1Q7Z4N2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRPM1Q7Z4N2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TRPM1Q7Z4N2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC28.1■■■□□ 2.09
TRPM1Q7Z4N2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC28.1■■■□□ 2.09
TRPM1Q7Z4N2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRPM1Q7Z4N2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC28.1■■■□□ 2.09
TRPM1Q7Z4N2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC28.1■■■□□ 2.09
TRPM1Q7Z4N2 AL049637.2-201ENST00000641778 930 ntBASIC28.1■■■□□ 2.09
TRPM1Q7Z4N2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TRPM1Q7Z4N2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 MIR4497-201ENST00000583208 89 ntBASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 AL353708.3-201ENST00000610272 989 ntBASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM1Q7Z4N2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC28.08■■■□□ 2.09
TRPM1Q7Z4N2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 SNORA78-201ENST00000459373 127 ntBASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 AC092667.1-201ENST00000434301 2586 ntBASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 AP001271.2-201ENST00000624018 1556 ntBASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 MIR718-201ENST00000390190 70 ntBASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TRPM1Q7Z4N2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRPM1Q7Z4N2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
TRPM1Q7Z4N2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC28.06■■■□□ 2.08
TRPM1Q7Z4N2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRPM1Q7Z4N2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC28.06■■■□□ 2.08
TRPM1Q7Z4N2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRPM1Q7Z4N2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRPM1Q7Z4N2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms