Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS13CQ709C8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS13CQ709C8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS13CQ709C8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS13CQ709C8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS13CQ709C8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS13CQ709C8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS13CQ709C8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS13CQ709C8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS13CQ709C8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
VPS13CQ709C8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.71■□□□□ 0.26
VPS13CQ709C8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.71■□□□□ 0.26
VPS13CQ709C8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
VPS13CQ709C8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
VPS13CQ709C8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.71■□□□□ 0.26
VPS13CQ709C8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.71■□□□□ 0.26
VPS13CQ709C8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13CQ709C8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13CQ709C8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13CQ709C8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
VPS13CQ709C8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS13CQ709C8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13CQ709C8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13CQ709C8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS13CQ709C8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.7■□□□□ 0.26
VPS13CQ709C8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13CQ709C8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS13CQ709C8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13CQ709C8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13CQ709C8 AC023632.3-201ENST00000521633 145 ntBASIC16.7■□□□□ 0.26
VPS13CQ709C8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
VPS13CQ709C8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.7■□□□□ 0.26
VPS13CQ709C8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.7■□□□□ 0.26
VPS13CQ709C8 CR392000.1-201ENST00000624770 1228 ntBASIC16.7■□□□□ 0.26
VPS13CQ709C8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
VPS13CQ709C8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
VPS13CQ709C8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13CQ709C8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13CQ709C8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13CQ709C8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13CQ709C8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13CQ709C8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
VPS13CQ709C8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
VPS13CQ709C8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
VPS13CQ709C8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
VPS13CQ709C8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.69■□□□□ 0.26
VPS13CQ709C8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
VPS13CQ709C8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
VPS13CQ709C8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.69■□□□□ 0.26
VPS13CQ709C8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13CQ709C8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS13CQ709C8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.68■□□□□ 0.26
VPS13CQ709C8 DGCR10-201ENST00000609839 495 ntBASIC16.68■□□□□ 0.26
VPS13CQ709C8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS13CQ709C8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VPS13CQ709C8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.68■□□□□ 0.26
VPS13CQ709C8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
VPS13CQ709C8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS13CQ709C8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.68■□□□□ 0.26
VPS13CQ709C8 PGM5P4-201ENST00000421970 445 ntBASIC16.68■□□□□ 0.26
VPS13CQ709C8 AC117947.1-201ENST00000427448 529 ntBASIC16.68■□□□□ 0.26
VPS13CQ709C8 NAPSB-206ENST00000562112 1266 ntBASIC16.68■□□□□ 0.26
VPS13CQ709C8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
VPS13CQ709C8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS13CQ709C8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VPS13CQ709C8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS13CQ709C8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms