Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 AC093484.2-201ENST00000580996 2166 ntBASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTCHD4Q6ZW05 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCHD4Q6ZW05 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 RBM17P2-201ENST00000616397 1405 ntBASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 AC091799.1-201ENST00000422823 811 ntBASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCHD4Q6ZW05 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTCHD4Q6ZW05 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTCHD4Q6ZW05 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTCHD4Q6ZW05 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PTCHD4Q6ZW05 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PTCHD4Q6ZW05 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 BX119927.1-201ENST00000636596 1552 ntBASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms