Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.16■□□□□ 0.5
TMEM53Q6P2H8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 AC116562.4-201ENST00000641316 2276 ntBASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 AP000997.3-201ENST00000623333 2250 ntBASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM53Q6P2H8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TMEM53Q6P2H8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TMEM53Q6P2H8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TMEM53Q6P2H8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.14■□□□□ 0.5
TMEM53Q6P2H8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 AC006015.1-201ENST00000429970 570 ntBASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 AL137784.2-201ENST00000607332 1000 ntBASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 AC243732.1-201ENST00000612648 864 ntBASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 BID-214ENST00000617586 542 ntTSL 5 BASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 RARRES2P11-201ENST00000635158 484 ntBASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 AL049812.1-201ENST00000432563 2267 ntBASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM53Q6P2H8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 AC010536.3-201ENST00000620306 533 ntBASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM53Q6P2H8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms