Protein–RNA interactions for Protein: Q6P1M0

SLC27A4, Long-chain fatty acid transport protein 4, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A4Q6P1M0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 TNXA-203ENST00000507684 2038 ntBASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC27A4Q6P1M0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 AC087623.3-201ENST00000607047 1098 ntBASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC27A4Q6P1M0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC27A4Q6P1M0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC27A4Q6P1M0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC27A4Q6P1M0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SLC27A4Q6P1M0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC27A4Q6P1M0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.08■□□□□ 0.49
SLC27A4Q6P1M0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC27A4Q6P1M0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC27A4Q6P1M0 AC004854.2-201ENST00000608450 1441 ntBASIC18.08■□□□□ 0.49
SLC27A4Q6P1M0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC27A4Q6P1M0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC27A4Q6P1M0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 AC009237.14-201ENST00000609975 1594 ntBASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC27A4Q6P1M0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC27A4Q6P1M0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A4Q6P1M0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC27A4Q6P1M0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A4Q6P1M0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A4Q6P1M0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC27A4Q6P1M0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms