Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF220Q5VTB9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
RNF220Q5VTB9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF220Q5VTB9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF220Q5VTB9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF220Q5VTB9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF220Q5VTB9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF220Q5VTB9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF220Q5VTB9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF220Q5VTB9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 AC010141.2-201ENST00000452426 721 ntBASIC19.12■□□□□ 0.65
RNF220Q5VTB9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 TERF1P2-201ENST00000583350 1212 ntBASIC19.12■□□□□ 0.65
RNF220Q5VTB9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF220Q5VTB9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 KRT16P2-201ENST00000414673 1423 ntBASIC19.11■□□□□ 0.65
RNF220Q5VTB9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.11■□□□□ 0.65
RNF220Q5VTB9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RNF220Q5VTB9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF220Q5VTB9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
RNF220Q5VTB9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms