Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 UNC93B7-201ENST00000509439 705 ntBASIC17.44■□□□□ 0.38
LRRK2Q5S007 C1QL1P1-201ENST00000568105 661 ntBASIC17.44■□□□□ 0.38
LRRK2Q5S007 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
LRRK2Q5S007 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRK2Q5S007 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRK2Q5S007 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.43■□□□□ 0.38
LRRK2Q5S007 RCC2P6-201ENST00000526625 1557 ntBASIC17.43■□□□□ 0.38
LRRK2Q5S007 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.43■□□□□ 0.38
LRRK2Q5S007 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRK2Q5S007 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.43■□□□□ 0.38
LRRK2Q5S007 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LRRK2Q5S007 AL031432.5-201ENST00000641059 760 ntBASIC17.43■□□□□ 0.38
LRRK2Q5S007 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRK2Q5S007 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRK2Q5S007 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRK2Q5S007 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRK2Q5S007 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRK2Q5S007 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRK2Q5S007 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.43■□□□□ 0.38
LRRK2Q5S007 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.43■□□□□ 0.38
LRRK2Q5S007 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRK2Q5S007 NPAP1P7-201ENST00000613027 823 ntBASIC17.43■□□□□ 0.38
LRRK2Q5S007 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRK2Q5S007 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
LRRK2Q5S007 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRK2Q5S007 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LRRK2Q5S007 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRK2Q5S007 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRK2Q5S007 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRK2Q5S007 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.42■□□□□ 0.38
LRRK2Q5S007 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRRK2Q5S007 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.42■□□□□ 0.38
LRRK2Q5S007 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.42■□□□□ 0.38
LRRK2Q5S007 MIR3180-1-201ENST00000580374 94 ntBASIC17.42■□□□□ 0.38
LRRK2Q5S007 MIR3180-3-201ENST00000584616 94 ntBASIC17.42■□□□□ 0.38
LRRK2Q5S007 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRRK2Q5S007 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LRRK2Q5S007 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRK2Q5S007 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRK2Q5S007 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRK2Q5S007 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRK2Q5S007 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRK2Q5S007 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRK2Q5S007 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRK2Q5S007 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRK2Q5S007 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRK2Q5S007 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRK2Q5S007 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRK2Q5S007 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LRRK2Q5S007 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRK2Q5S007 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRK2Q5S007 PTBP1P-201ENST00000554374 1601 ntBASIC17.41■□□□□ 0.38
LRRK2Q5S007 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRK2Q5S007 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LRRK2Q5S007 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRK2Q5S007 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRK2Q5S007 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRRK2Q5S007 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.41■□□□□ 0.38
LRRK2Q5S007 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.41■□□□□ 0.38
LRRK2Q5S007 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRK2Q5S007 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
LRRK2Q5S007 AC010653.2-201ENST00000623505 997 ntBASIC17.41■□□□□ 0.38
LRRK2Q5S007 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRK2Q5S007 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRK2Q5S007 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRK2Q5S007 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRK2Q5S007 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRK2Q5S007 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRK2Q5S007 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRK2Q5S007 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRK2Q5S007 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRK2Q5S007 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRK2Q5S007 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRK2Q5S007 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRK2Q5S007 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRK2Q5S007 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRK2Q5S007 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRK2Q5S007 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRK2Q5S007 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRK2Q5S007 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
LRRK2Q5S007 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRK2Q5S007 AC141257.4-201ENST00000634557 245 ntBASIC17.4■□□□□ 0.38
LRRK2Q5S007 AC136944.6-201ENST00000634818 245 ntBASIC17.4■□□□□ 0.38
LRRK2Q5S007 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRK2Q5S007 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRK2Q5S007 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRK2Q5S007 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRK2Q5S007 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRK2Q5S007 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRK2Q5S007 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRK2Q5S007 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRK2Q5S007 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRK2Q5S007 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
LRRK2Q5S007 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRK2Q5S007 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRK2Q5S007 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRK2Q5S007 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRK2Q5S007 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.39■□□□□ 0.37
LRRK2Q5S007 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRK2Q5S007 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms