Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RUNDC3AQ59EK9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.81■□□□□ 0.6
RUNDC3AQ59EK9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RUNDC3AQ59EK9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RUNDC3AQ59EK9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RUNDC3AQ59EK9 KRT8P17-201ENST00000453110 1448 ntBASIC18.81■□□□□ 0.6
RUNDC3AQ59EK9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.81■□□□□ 0.6
RUNDC3AQ59EK9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.81■□□□□ 0.6
RUNDC3AQ59EK9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
RUNDC3AQ59EK9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RUNDC3AQ59EK9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RUNDC3AQ59EK9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
RUNDC3AQ59EK9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RUNDC3AQ59EK9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RUNDC3AQ59EK9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RUNDC3AQ59EK9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 AL162412.1-201ENST00000567129 965 ntBASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 AC010536.3-201ENST00000620306 533 ntBASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RUNDC3AQ59EK9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 AC016405.3-201ENST00000607710 860 ntBASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RUNDC3AQ59EK9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms