Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 DUSP5P2-201ENST00000426873 1033 ntBASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 AC007225.1-201ENST00000566331 1836 ntBASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
KHDC1Q4VXA5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KHDC1Q4VXA5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KHDC1Q4VXA5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KHDC1Q4VXA5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
KHDC1Q4VXA5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.15■□□□□ 0.82
KHDC1Q4VXA5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.15■□□□□ 0.82
KHDC1Q4VXA5 AL589743.5-201ENST00000616611 1050 ntBASIC20.15■□□□□ 0.82
KHDC1Q4VXA5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KHDC1Q4VXA5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KHDC1Q4VXA5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
KHDC1Q4VXA5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KHDC1Q4VXA5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KHDC1Q4VXA5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KHDC1Q4VXA5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.82
KHDC1Q4VXA5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
KHDC1Q4VXA5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
KHDC1Q4VXA5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 KRT8P36-201ENST00000489121 1440 ntBASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 AC073210.2-201ENST00000430369 194 ntBASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 AC083880.1-201ENST00000608266 535 ntBASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 MYC-209ENST00000641252 345 ntBASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 AC020907.5-201ENST00000624372 1936 ntBASIC20.14■□□□□ 0.81
KHDC1Q4VXA5 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.13■□□□□ 0.81
KHDC1Q4VXA5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KHDC1Q4VXA5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KHDC1Q4VXA5 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
KHDC1Q4VXA5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KHDC1Q4VXA5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KHDC1Q4VXA5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.13■□□□□ 0.81
KHDC1Q4VXA5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KHDC1Q4VXA5 AC091874.3-201ENST00000512672 1195 ntBASIC20.13■□□□□ 0.81
KHDC1Q4VXA5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.13■□□□□ 0.81
KHDC1Q4VXA5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
KHDC1Q4VXA5 AC133041.1-202ENST00000642053 222 ntBASIC20.13■□□□□ 0.81
KHDC1Q4VXA5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
KHDC1Q4VXA5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
KHDC1Q4VXA5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.12■□□□□ 0.81
KHDC1Q4VXA5 AC116562.4-201ENST00000641316 2276 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms