Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 AC093787.1-201ENST00000450396 207 ntBASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHRFAM7AQ494W8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 MYC-209ENST00000641252 345 ntBASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 AC112907.3-201ENST00000577781 2400 ntBASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 AL512408.1-201ENST00000569378 2000 ntBASIC17.37■□□□□ 0.37
CHRFAM7AQ494W8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 AC120498.10-201ENST00000621827 505 ntBASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRFAM7AQ494W8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms