Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SF3A2Q15428 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.75■□□□□ 0.75
SF3A2Q15428 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SF3A2Q15428 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.75■□□□□ 0.75
SF3A2Q15428 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.75■□□□□ 0.75
SF3A2Q15428 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.75■□□□□ 0.75
SF3A2Q15428 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.75■□□□□ 0.75
SF3A2Q15428 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.75■□□□□ 0.75
SF3A2Q15428 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SF3A2Q15428 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.75■□□□□ 0.75
SF3A2Q15428 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SF3A2Q15428 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.75■□□□□ 0.75
SF3A2Q15428 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SF3A2Q15428 ECEL1P2-202ENST00000465689 757 ntBASIC19.75■□□□□ 0.75
SF3A2Q15428 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SF3A2Q15428 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SF3A2Q15428 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.75■□□□□ 0.75
SF3A2Q15428 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SF3A2Q15428 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
SF3A2Q15428 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SF3A2Q15428 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SF3A2Q15428 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SF3A2Q15428 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SF3A2Q15428 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SF3A2Q15428 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.74■□□□□ 0.75
SF3A2Q15428 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SF3A2Q15428 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SF3A2Q15428 NIFKP9-201ENST00000419265 221 ntBASIC19.74■□□□□ 0.75
SF3A2Q15428 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.74■□□□□ 0.75
SF3A2Q15428 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SF3A2Q15428 KRT18P56-201ENST00000507275 550 ntBASIC19.74■□□□□ 0.75
SF3A2Q15428 AC023632.3-201ENST00000521633 145 ntBASIC19.74■□□□□ 0.75
SF3A2Q15428 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.74■□□□□ 0.75
SF3A2Q15428 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.74■□□□□ 0.75
SF3A2Q15428 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.74■□□□□ 0.75
SF3A2Q15428 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.74■□□□□ 0.75
SF3A2Q15428 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.74■□□□□ 0.75
SF3A2Q15428 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SF3A2Q15428 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.74■□□□□ 0.75
SF3A2Q15428 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SF3A2Q15428 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SF3A2Q15428 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SF3A2Q15428 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SF3A2Q15428 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SF3A2Q15428 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SF3A2Q15428 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.73■□□□□ 0.75
SF3A2Q15428 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 AK4P3-201ENST00000418260 669 ntBASIC19.73■□□□□ 0.75
SF3A2Q15428 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SF3A2Q15428 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
SF3A2Q15428 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.73■□□□□ 0.75
SF3A2Q15428 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SF3A2Q15428 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.73■□□□□ 0.75
SF3A2Q15428 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.73■□□□□ 0.75
SF3A2Q15428 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SF3A2Q15428 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.72■□□□□ 0.75
SF3A2Q15428 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.72■□□□□ 0.75
SF3A2Q15428 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SF3A2Q15428 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SF3A2Q15428 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.72■□□□□ 0.75
SF3A2Q15428 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SF3A2Q15428 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SF3A2Q15428 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SF3A2Q15428 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SF3A2Q15428 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SF3A2Q15428 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SF3A2Q15428 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.72■□□□□ 0.75
SF3A2Q15428 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SF3A2Q15428 AC022616.7-201ENST00000525383 220 ntBASIC19.72■□□□□ 0.75
SF3A2Q15428 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.72■□□□□ 0.75
SF3A2Q15428 KRT126P-201ENST00000549467 1181 ntBASIC19.72■□□□□ 0.75
SF3A2Q15428 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.72■□□□□ 0.75
SF3A2Q15428 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SF3A2Q15428 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SF3A2Q15428 AC027702.1-201ENST00000563810 1770 ntBASIC19.72■□□□□ 0.75
SF3A2Q15428 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SF3A2Q15428 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SF3A2Q15428 AC242852.2-201ENST00000615738 1807 ntBASIC19.72■□□□□ 0.75
SF3A2Q15428 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms