Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SKP1P63208 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SKP1P63208 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SKP1P63208 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SKP1P63208 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SKP1P63208 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SKP1P63208 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SKP1P63208 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.92■□□□□ 0.62
SKP1P63208 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SKP1P63208 POU5F1P3-201ENST00000428824 1078 ntBASIC18.92■□□□□ 0.62
SKP1P63208 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.92■□□□□ 0.62
SKP1P63208 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
SKP1P63208 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SKP1P63208 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SKP1P63208 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.92■□□□□ 0.62
SKP1P63208 AC006557.6-201ENST00000623071 864 ntBASIC18.92■□□□□ 0.62
SKP1P63208 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SKP1P63208 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.92■□□□□ 0.62
SKP1P63208 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SKP1P63208 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SKP1P63208 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SKP1P63208 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SKP1P63208 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SKP1P63208 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SKP1P63208 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SKP1P63208 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SKP1P63208 SMG8-203ENST00000578922 2178 ntBASIC18.91■□□□□ 0.62
SKP1P63208 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SKP1P63208 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SKP1P63208 POM121L13P-201ENST00000422362 380 ntBASIC18.91■□□□□ 0.62
SKP1P63208 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.91■□□□□ 0.62
SKP1P63208 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.91■□□□□ 0.62
SKP1P63208 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.91■□□□□ 0.62
SKP1P63208 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SKP1P63208 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.91■□□□□ 0.62
SKP1P63208 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SKP1P63208 AC120498.8-201ENST00000614275 531 ntBASIC18.91■□□□□ 0.62
SKP1P63208 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.91■□□□□ 0.62
SKP1P63208 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.91■□□□□ 0.62
SKP1P63208 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SKP1P63208 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SKP1P63208 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SKP1P63208 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.9■□□□□ 0.62
SKP1P63208 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SKP1P63208 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.9■□□□□ 0.62
SKP1P63208 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
SKP1P63208 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.9■□□□□ 0.62
SKP1P63208 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SKP1P63208 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SKP1P63208 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.9■□□□□ 0.62
SKP1P63208 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SKP1P63208 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.9■□□□□ 0.62
SKP1P63208 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SKP1P63208 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SKP1P63208 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.9■□□□□ 0.62
SKP1P63208 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SKP1P63208 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.9■□□□□ 0.62
SKP1P63208 AL121906.2-201ENST00000621597 723 ntBASIC18.9■□□□□ 0.62
SKP1P63208 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SKP1P63208 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.9■□□□□ 0.62
SKP1P63208 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SKP1P63208 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.9■□□□□ 0.62
SKP1P63208 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.9■□□□□ 0.62
SKP1P63208 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SKP1P63208 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
SKP1P63208 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.89■□□□□ 0.62
SKP1P63208 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SKP1P63208 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SKP1P63208 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SKP1P63208 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SKP1P63208 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SKP1P63208 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SKP1P63208 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
SKP1P63208 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SKP1P63208 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SKP1P63208 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SKP1P63208 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SKP1P63208 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.89■□□□□ 0.61
SKP1P63208 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SKP1P63208 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SKP1P63208 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.89■□□□□ 0.61
SKP1P63208 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.89■□□□□ 0.61
SKP1P63208 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SKP1P63208 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.89■□□□□ 0.61
SKP1P63208 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.89■□□□□ 0.61
SKP1P63208 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.89■□□□□ 0.61
SKP1P63208 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SKP1P63208 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.89■□□□□ 0.61
SKP1P63208 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SKP1P63208 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.89■□□□□ 0.61
SKP1P63208 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.89■□□□□ 0.61
SKP1P63208 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SKP1P63208 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SKP1P63208 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SKP1P63208 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SKP1P63208 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.88■□□□□ 0.61
SKP1P63208 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SKP1P63208 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SKP1P63208 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.88■□□□□ 0.61
SKP1P63208 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms