Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CKS1BP61024 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS1BP61024 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS1BP61024 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
CKS1BP61024 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CKS1BP61024 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC13.9□□□□□ -0.18
CKS1BP61024 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC13.9□□□□□ -0.18
CKS1BP61024 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CKS1BP61024 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC13.9□□□□□ -0.18
CKS1BP61024 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.9□□□□□ -0.18
CKS1BP61024 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC13.9□□□□□ -0.18
CKS1BP61024 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CKS1BP61024 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS1BP61024 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS1BP61024 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS1BP61024 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.9□□□□□ -0.18
CKS1BP61024 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS1BP61024 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS1BP61024 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS1BP61024 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS1BP61024 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.9□□□□□ -0.18
CKS1BP61024 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS1BP61024 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS1BP61024 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS1BP61024 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC13.9□□□□□ -0.18
CKS1BP61024 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CKS1BP61024 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.19
CKS1BP61024 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC13.9□□□□□ -0.19
CKS1BP61024 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CKS1BP61024 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CKS1BP61024 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CKS1BP61024 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CKS1BP61024 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS1BP61024 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CKS1BP61024 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS1BP61024 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS1BP61024 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CKS1BP61024 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS1BP61024 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CKS1BP61024 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.89□□□□□ -0.19
CKS1BP61024 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS1BP61024 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC13.89□□□□□ -0.19
CKS1BP61024 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC13.89□□□□□ -0.19
CKS1BP61024 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CKS1BP61024 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS1BP61024 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CKS1BP61024 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CKS1BP61024 GUSBP5-201ENST00000418136 578 ntBASIC13.89□□□□□ -0.19
CKS1BP61024 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CKS1BP61024 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.89□□□□□ -0.19
CKS1BP61024 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CKS1BP61024 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS1BP61024 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS1BP61024 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC13.89□□□□□ -0.19
CKS1BP61024 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.89□□□□□ -0.19
CKS1BP61024 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CKS1BP61024 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.89□□□□□ -0.19
CKS1BP61024 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CKS1BP61024 MST1L-201ENST00000442552 2185 ntBASIC13.89□□□□□ -0.19
CKS1BP61024 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC13.89□□□□□ -0.19
CKS1BP61024 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
CKS1BP61024 PLK5-205ENST00000642079 1969 ntBASIC13.89□□□□□ -0.19
CKS1BP61024 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC13.89□□□□□ -0.19
CKS1BP61024 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CKS1BP61024 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CKS1BP61024 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 CROCCP1-201ENST00000426910 5675 ntBASIC13.88□□□□□ -0.19
CKS1BP61024 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.88□□□□□ -0.19
CKS1BP61024 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CKS1BP61024 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CKS1BP61024 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC13.88□□□□□ -0.19
CKS1BP61024 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC13.88□□□□□ -0.19
CKS1BP61024 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC13.88□□□□□ -0.19
CKS1BP61024 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC13.88□□□□□ -0.19
CKS1BP61024 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC13.88□□□□□ -0.19
CKS1BP61024 AL512631.2-201ENST00000604634 923 ntBASIC13.88□□□□□ -0.19
CKS1BP61024 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CKS1BP61024 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CKS1BP61024 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS1BP61024 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CKS1BP61024 AC008894.3-201ENST00000624324 3103 ntBASIC13.88□□□□□ -0.19
CKS1BP61024 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CKS1BP61024 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CKS1BP61024 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.87□□□□□ -0.19
CKS1BP61024 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms