Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLDN12P56749 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN12P56749 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN12P56749 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN12P56749 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN12P56749 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLDN12P56749 AC010141.2-201ENST00000452426 721 ntBASIC17.31■□□□□ 0.36
CLDN12P56749 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CLDN12P56749 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN12P56749 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN12P56749 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN12P56749 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN12P56749 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN12P56749 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN12P56749 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN12P56749 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN12P56749 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLDN12P56749 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN12P56749 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLDN12P56749 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN12P56749 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN12P56749 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN12P56749 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN12P56749 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN12P56749 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN12P56749 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN12P56749 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN12P56749 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN12P56749 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN12P56749 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN12P56749 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN12P56749 EDA-201ENST00000338901 1233 ntBASIC17.3■□□□□ 0.36
CLDN12P56749 MIR939-201ENST00000401314 82 ntBASIC17.3■□□□□ 0.36
CLDN12P56749 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN12P56749 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN12P56749 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.3■□□□□ 0.36
CLDN12P56749 AL354811.1-201ENST00000610286 706 ntBASIC17.3■□□□□ 0.36
CLDN12P56749 AC106739.1-201ENST00000617035 715 ntBASIC17.3■□□□□ 0.36
CLDN12P56749 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN12P56749 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN12P56749 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN12P56749 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN12P56749 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN12P56749 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLDN12P56749 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CLDN12P56749 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN12P56749 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLDN12P56749 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLDN12P56749 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CLDN12P56749 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN12P56749 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN12P56749 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN12P56749 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN12P56749 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN12P56749 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN12P56749 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN12P56749 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN12P56749 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN12P56749 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN12P56749 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN12P56749 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN12P56749 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN12P56749 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN12P56749 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CLDN12P56749 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CLDN12P56749 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLDN12P56749 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN12P56749 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN12P56749 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLDN12P56749 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN12P56749 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN12P56749 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN12P56749 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN12P56749 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN12P56749 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN12P56749 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN12P56749 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN12P56749 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLDN12P56749 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN12P56749 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN12P56749 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN12P56749 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN12P56749 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN12P56749 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN12P56749 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CLDN12P56749 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLDN12P56749 AL355001.2-201ENST00000620617 1191 ntBASIC17.28■□□□□ 0.36
CLDN12P56749 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN12P56749 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CLDN12P56749 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN12P56749 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN12P56749 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN12P56749 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN12P56749 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN12P56749 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CLDN12P56749 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.28■□□□□ 0.36
CLDN12P56749 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN12P56749 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN12P56749 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN12P56749 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms