Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
CLDN6P56747 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN6P56747 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN6P56747 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN6P56747 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN6P56747 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN6P56747 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CLDN6P56747 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN6P56747 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLDN6P56747 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN6P56747 AC027702.1-201ENST00000563810 1770 ntBASIC19.19■□□□□ 0.66
CLDN6P56747 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN6P56747 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLDN6P56747 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CLDN6P56747 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN6P56747 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CLDN6P56747 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.18■□□□□ 0.66
CLDN6P56747 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN6P56747 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.18■□□□□ 0.66
CLDN6P56747 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN6P56747 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLDN6P56747 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.18■□□□□ 0.66
CLDN6P56747 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN6P56747 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLDN6P56747 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN6P56747 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN6P56747 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN6P56747 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN6P56747 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN6P56747 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN6P56747 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLDN6P56747 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN6P56747 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
CLDN6P56747 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN6P56747 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN6P56747 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN6P56747 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
CLDN6P56747 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN6P56747 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN6P56747 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CLDN6P56747 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN6P56747 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN6P56747 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLDN6P56747 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLDN6P56747 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN6P56747 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN6P56747 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN6P56747 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN6P56747 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN6P56747 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN6P56747 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN6P56747 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CLDN6P56747 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN6P56747 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN6P56747 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN6P56747 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN6P56747 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLDN6P56747 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN6P56747 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN6P56747 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN6P56747 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN6P56747 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CLDN6P56747 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLDN6P56747 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN6P56747 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN6P56747 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN6P56747 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLDN6P56747 AC116562.2-201ENST00000507042 360 ntBASIC19.16■□□□□ 0.66
CLDN6P56747 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.16■□□□□ 0.66
CLDN6P56747 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CLDN6P56747 AC006011.2-201ENST00000621313 1158 ntBASIC19.16■□□□□ 0.66
CLDN6P56747 MIR2861-201ENST00000636310 90 ntBASIC19.16■□□□□ 0.66
CLDN6P56747 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN6P56747 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN6P56747 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN6P56747 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN6P56747 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.16■□□□□ 0.66
CLDN6P56747 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CLDN6P56747 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CLDN6P56747 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN6P56747 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN6P56747 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN6P56747 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN6P56747 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN6P56747 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN6P56747 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms