Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3AP56704 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3AP56704 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.17■□□□□ 0.82
WNT3AP56704 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.17■□□□□ 0.82
WNT3AP56704 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.17■□□□□ 0.82
WNT3AP56704 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3AP56704 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3AP56704 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3AP56704 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
WNT3AP56704 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3AP56704 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3AP56704 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3AP56704 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3AP56704 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3AP56704 AL355802.2-201ENST00000402069 882 ntBASIC20.16■□□□□ 0.82
WNT3AP56704 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
WNT3AP56704 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3AP56704 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.16■□□□□ 0.82
WNT3AP56704 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.16■□□□□ 0.82
WNT3AP56704 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3AP56704 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
WNT3AP56704 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.16■□□□□ 0.82
WNT3AP56704 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3AP56704 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3AP56704 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.16■□□□□ 0.82
WNT3AP56704 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.15■□□□□ 0.82
WNT3AP56704 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3AP56704 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3AP56704 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3AP56704 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3AP56704 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3AP56704 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3AP56704 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
WNT3AP56704 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3AP56704 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.15■□□□□ 0.82
WNT3AP56704 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
WNT3AP56704 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.15■□□□□ 0.82
WNT3AP56704 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.15■□□□□ 0.82
WNT3AP56704 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.15■□□□□ 0.82
WNT3AP56704 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3AP56704 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3AP56704 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3AP56704 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3AP56704 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3AP56704 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3AP56704 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
WNT3AP56704 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.14■□□□□ 0.82
WNT3AP56704 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.14■□□□□ 0.81
WNT3AP56704 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
WNT3AP56704 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
WNT3AP56704 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
WNT3AP56704 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
WNT3AP56704 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
WNT3AP56704 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.14■□□□□ 0.81
WNT3AP56704 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
WNT3AP56704 AC005829.2-201ENST00000571422 1056 ntBASIC20.14■□□□□ 0.81
WNT3AP56704 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
WNT3AP56704 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
WNT3AP56704 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.14■□□□□ 0.81
WNT3AP56704 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
WNT3AP56704 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.14■□□□□ 0.81
WNT3AP56704 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
WNT3AP56704 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3AP56704 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3AP56704 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3AP56704 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.13■□□□□ 0.81
WNT3AP56704 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3AP56704 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3AP56704 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3AP56704 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.13■□□□□ 0.81
WNT3AP56704 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.13■□□□□ 0.81
WNT3AP56704 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3AP56704 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.13■□□□□ 0.81
WNT3AP56704 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.13■□□□□ 0.81
WNT3AP56704 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3AP56704 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.12■□□□□ 0.81
WNT3AP56704 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
WNT3AP56704 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3AP56704 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3AP56704 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.12■□□□□ 0.81
WNT3AP56704 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3AP56704 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.12■□□□□ 0.81
WNT3AP56704 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.12■□□□□ 0.81
WNT3AP56704 AL390719.1-204ENST00000412397 1219 ntBASIC20.12■□□□□ 0.81
WNT3AP56704 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3AP56704 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.12■□□□□ 0.81
WNT3AP56704 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3AP56704 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
WNT3AP56704 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3AP56704 HLA-B-256ENST00000639848 1089 ntBASIC20.12■□□□□ 0.81
WNT3AP56704 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3AP56704 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
WNT3AP56704 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3AP56704 TMEM179-206ENST00000616017 1645 ntBASIC20.12■□□□□ 0.81
WNT3AP56704 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.12■□□□□ 0.81
WNT3AP56704 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.12■□□□□ 0.81
WNT3AP56704 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.12■□□□□ 0.81
WNT3AP56704 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
WNT3AP56704 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
WNT3AP56704 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms