Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH4P55283 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CDH4P55283 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.4■□□□□ 0.86
CDH4P55283 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.4■□□□□ 0.86
CDH4P55283 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CDH4P55283 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH4P55283 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.4■□□□□ 0.86
CDH4P55283 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH4P55283 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH4P55283 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CDH4P55283 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDH4P55283 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDH4P55283 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.39■□□□□ 0.86
CDH4P55283 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CDH4P55283 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.39■□□□□ 0.86
CDH4P55283 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH4P55283 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH4P55283 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
CDH4P55283 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CDH4P55283 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH4P55283 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH4P55283 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CDH4P55283 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH4P55283 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CDH4P55283 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CDH4P55283 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH4P55283 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH4P55283 RPPH1-201ENST00000516869 333 ntBASIC20.39■□□□□ 0.85
CDH4P55283 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.39■□□□□ 0.85
CDH4P55283 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.39■□□□□ 0.85
CDH4P55283 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CDH4P55283 AL359736.2-201ENST00000621992 437 ntBASIC20.39■□□□□ 0.85
CDH4P55283 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH4P55283 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH4P55283 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH4P55283 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.39■□□□□ 0.85
CDH4P55283 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH4P55283 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH4P55283 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CDH4P55283 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH4P55283 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH4P55283 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH4P55283 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CDH4P55283 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH4P55283 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH4P55283 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH4P55283 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 AL023875.1-201ENST00000640777 796 ntBASIC20.38■□□□□ 0.85
CDH4P55283 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 PHGDH-210ENST00000641115 1638 ntBASIC20.38■□□□□ 0.85
CDH4P55283 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH4P55283 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CDH4P55283 AC116351.2-201ENST00000606540 1585 ntBASIC20.38■□□□□ 0.85
CDH4P55283 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH4P55283 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH4P55283 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH4P55283 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH4P55283 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH4P55283 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH4P55283 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH4P55283 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH4P55283 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDH4P55283 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH4P55283 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH4P55283 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.37■□□□□ 0.85
CDH4P55283 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDH4P55283 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH4P55283 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.37■□□□□ 0.85
CDH4P55283 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDH4P55283 AC239809.2-201ENST00000415381 517 ntBASIC20.37■□□□□ 0.85
CDH4P55283 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDH4P55283 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH4P55283 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CDH4P55283 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.37■□□□□ 0.85
CDH4P55283 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH4P55283 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.37■□□□□ 0.85
CDH4P55283 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH4P55283 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH4P55283 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH4P55283 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH4P55283 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH4P55283 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH4P55283 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
CDH4P55283 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.37■□□□□ 0.85
CDH4P55283 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CDH4P55283 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH4P55283 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH4P55283 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms