Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC239809.2-201ENST00000415381 517 ntBASIC20.28■□□□□ 0.84
ATXN3P54252 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.28■□□□□ 0.84
ATXN3P54252 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.28■□□□□ 0.84
ATXN3P54252 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 AC133561.5-201ENST00000635547 218 ntBASIC20.28■□□□□ 0.84
ATXN3P54252 CYP21A1P-202ENST00000354927 1481 ntBASIC20.28■□□□□ 0.84
ATXN3P54252 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.28■□□□□ 0.84
ATXN3P54252 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3P54252 AL135905.2-201ENST00000584934 1404 ntBASIC20.27■□□□□ 0.84
ATXN3P54252 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3P54252 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ATXN3P54252 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3P54252 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3P54252 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3P54252 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3P54252 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ATXN3P54252 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3P54252 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3P54252 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3P54252 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3P54252 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3P54252 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3P54252 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.27■□□□□ 0.84
ATXN3P54252 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3P54252 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.27■□□□□ 0.84
ATXN3P54252 MIR4785-201ENST00000585005 73 ntBASIC20.27■□□□□ 0.84
ATXN3P54252 AC105020.6-201ENST00000621523 1217 ntBASIC20.27■□□□□ 0.84
ATXN3P54252 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
ATXN3P54252 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ATXN3P54252 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ATXN3P54252 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3P54252 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ATXN3P54252 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
ATXN3P54252 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3P54252 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.26■□□□□ 0.83
ATXN3P54252 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.26■□□□□ 0.83
ATXN3P54252 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3P54252 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.26■□□□□ 0.83
ATXN3P54252 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3P54252 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ATXN3P54252 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.26■□□□□ 0.83
ATXN3P54252 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3P54252 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3P54252 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATXN3P54252 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.26■□□□□ 0.83
ATXN3P54252 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3P54252 AL023875.1-201ENST00000640777 796 ntBASIC20.26■□□□□ 0.83
ATXN3P54252 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3P54252 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.26■□□□□ 0.83
ATXN3P54252 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.26■□□□□ 0.83
ATXN3P54252 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3P54252 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3P54252 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3P54252 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3P54252 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3P54252 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3P54252 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3P54252 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3P54252 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3P54252 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3P54252 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3P54252 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ATXN3P54252 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.25■□□□□ 0.83
ATXN3P54252 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.25■□□□□ 0.83
ATXN3P54252 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3P54252 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.25■□□□□ 0.83
ATXN3P54252 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.25■□□□□ 0.83
ATXN3P54252 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
ATXN3P54252 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
ATXN3P54252 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.25■□□□□ 0.83
ATXN3P54252 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
ATXN3P54252 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ATXN3P54252 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.25■□□□□ 0.83
ATXN3P54252 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3P54252 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATXN3P54252 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3P54252 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3P54252 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3P54252 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.25■□□□□ 0.83
ATXN3P54252 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ATXN3P54252 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3P54252 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.24■□□□□ 0.83
ATXN3P54252 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3P54252 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.24■□□□□ 0.83
ATXN3P54252 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3P54252 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3P54252 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3P54252 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3P54252 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.24■□□□□ 0.83
ATXN3P54252 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.24■□□□□ 0.83
ATXN3P54252 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3P54252 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.24■□□□□ 0.83
ATXN3P54252 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.24■□□□□ 0.83
ATXN3P54252 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.24■□□□□ 0.83
ATXN3P54252 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATXN3P54252 AL049637.2-201ENST00000641778 930 ntBASIC20.24■□□□□ 0.83
ATXN3P54252 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms