Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 PTBP1P-201ENST00000554374 1601 ntBASIC20.44■□□□□ 0.86
ITGA8P53708 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ITGA8P53708 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
ITGA8P53708 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ITGA8P53708 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ITGA8P53708 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ITGA8P53708 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ITGA8P53708 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.44■□□□□ 0.86
ITGA8P53708 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ITGA8P53708 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ITGA8P53708 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ITGA8P53708 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
ITGA8P53708 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.43■□□□□ 0.86
ITGA8P53708 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.43■□□□□ 0.86
ITGA8P53708 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.43■□□□□ 0.86
ITGA8P53708 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.43■□□□□ 0.86
ITGA8P53708 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ITGA8P53708 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.43■□□□□ 0.86
ITGA8P53708 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.43■□□□□ 0.86
ITGA8P53708 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ITGA8P53708 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ITGA8P53708 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.43■□□□□ 0.86
ITGA8P53708 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.43■□□□□ 0.86
ITGA8P53708 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.43■□□□□ 0.86
ITGA8P53708 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ITGA8P53708 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ITGA8P53708 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ITGA8P53708 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
ITGA8P53708 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ITGA8P53708 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.42■□□□□ 0.86
ITGA8P53708 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
ITGA8P53708 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.42■□□□□ 0.86
ITGA8P53708 Z82202.1-201ENST00000623446 1880 ntBASIC20.42■□□□□ 0.86
ITGA8P53708 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
ITGA8P53708 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
ITGA8P53708 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ITGA8P53708 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.42■□□□□ 0.86
ITGA8P53708 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ITGA8P53708 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ITGA8P53708 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.42■□□□□ 0.86
ITGA8P53708 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.42■□□□□ 0.86
ITGA8P53708 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ITGA8P53708 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ITGA8P53708 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
ITGA8P53708 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ITGA8P53708 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ITGA8P53708 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ITGA8P53708 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ITGA8P53708 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.41■□□□□ 0.86
ITGA8P53708 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.41■□□□□ 0.86
ITGA8P53708 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.41■□□□□ 0.86
ITGA8P53708 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.41■□□□□ 0.86
ITGA8P53708 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.41■□□□□ 0.86
ITGA8P53708 AL591742.1-201ENST00000604433 565 ntBASIC20.41■□□□□ 0.86
ITGA8P53708 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.41■□□□□ 0.86
ITGA8P53708 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ITGA8P53708 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.41■□□□□ 0.86
ITGA8P53708 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ITGA8P53708 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.41■□□□□ 0.86
ITGA8P53708 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ITGA8P53708 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ITGA8P53708 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 TERF1P5-201ENST00000477545 1207 ntBASIC20.4■□□□□ 0.86
ITGA8P53708 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
ITGA8P53708 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.4■□□□□ 0.86
ITGA8P53708 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.4■□□□□ 0.86
ITGA8P53708 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ITGA8P53708 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITGA8P53708 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ITGA8P53708 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ITGA8P53708 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ITGA8P53708 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.39■□□□□ 0.86
ITGA8P53708 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
ITGA8P53708 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ITGA8P53708 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.39■□□□□ 0.86
ITGA8P53708 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.39■□□□□ 0.86
ITGA8P53708 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ITGA8P53708 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
ITGA8P53708 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ITGA8P53708 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.39■□□□□ 0.85
ITGA8P53708 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.39■□□□□ 0.85
ITGA8P53708 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ITGA8P53708 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ITGA8P53708 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ITGA8P53708 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ITGA8P53708 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ITGA8P53708 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms