Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC073508.3-201ENST00000619697 1419 ntBASIC17.44■□□□□ 0.38
HCFC1P51610 TERF1P1-201ENST00000311003 1181 ntBASIC17.44■□□□□ 0.38
HCFC1P51610 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC1P51610 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.44■□□□□ 0.38
HCFC1P51610 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC1P51610 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.44■□□□□ 0.38
HCFC1P51610 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC1P51610 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.44■□□□□ 0.38
HCFC1P51610 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC1P51610 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC1P51610 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.44■□□□□ 0.38
HCFC1P51610 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.43■□□□□ 0.38
HCFC1P51610 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 MIR1238-201ENST00000408483 83 ntBASIC17.43■□□□□ 0.38
HCFC1P51610 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.43■□□□□ 0.38
HCFC1P51610 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.43■□□□□ 0.38
HCFC1P51610 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.43■□□□□ 0.38
HCFC1P51610 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.43■□□□□ 0.38
HCFC1P51610 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.43■□□□□ 0.38
HCFC1P51610 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HCFC1P51610 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.43■□□□□ 0.38
HCFC1P51610 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HCFC1P51610 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HCFC1P51610 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.43■□□□□ 0.38
HCFC1P51610 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HCFC1P51610 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
HCFC1P51610 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.43■□□□□ 0.38
HCFC1P51610 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.43■□□□□ 0.38
HCFC1P51610 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
HCFC1P51610 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC1P51610 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.43■□□□□ 0.38
HCFC1P51610 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.43■□□□□ 0.38
HCFC1P51610 KRT18P22-201ENST00000402024 1347 ntBASIC17.42■□□□□ 0.38
HCFC1P51610 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC1P51610 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC1P51610 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.42■□□□□ 0.38
HCFC1P51610 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.42■□□□□ 0.38
HCFC1P51610 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.42■□□□□ 0.38
HCFC1P51610 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.42■□□□□ 0.38
HCFC1P51610 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC1P51610 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC1P51610 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
HCFC1P51610 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.42■□□□□ 0.38
HCFC1P51610 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC1P51610 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.42■□□□□ 0.38
HCFC1P51610 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC1P51610 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
HCFC1P51610 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC1P51610 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC1P51610 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC1P51610 Z98882.1-201ENST00000622160 2253 ntBASIC17.42■□□□□ 0.38
HCFC1P51610 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.42■□□□□ 0.38
HCFC1P51610 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.42■□□□□ 0.38
HCFC1P51610 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC1P51610 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HCFC1P51610 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.42■□□□□ 0.38
HCFC1P51610 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.42■□□□□ 0.38
HCFC1P51610 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.42■□□□□ 0.38
HCFC1P51610 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.42■□□□□ 0.38
HCFC1P51610 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.42■□□□□ 0.38
HCFC1P51610 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC1P51610 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC1P51610 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC1P51610 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC1P51610 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HCFC1P51610 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC1P51610 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC1P51610 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC1P51610 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.41■□□□□ 0.38
HCFC1P51610 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC1P51610 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HCFC1P51610 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.41■□□□□ 0.38
HCFC1P51610 C1QL1P1-201ENST00000568105 661 ntBASIC17.41■□□□□ 0.38
HCFC1P51610 NTF6B-201ENST00000591913 560 ntBASIC17.41■□□□□ 0.38
HCFC1P51610 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC1P51610 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC1P51610 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.41■□□□□ 0.38
HCFC1P51610 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.41■□□□□ 0.38
HCFC1P51610 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC1P51610 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC1P51610 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC1P51610 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC1P51610 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.41■□□□□ 0.38
HCFC1P51610 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC1P51610 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.4■□□□□ 0.38
HCFC1P51610 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms