Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.5■□□□□ 0.39
CX3CR1P49238 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CX3CR1P49238 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CX3CR1P49238 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.5■□□□□ 0.39
CX3CR1P49238 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CX3CR1P49238 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CX3CR1P49238 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.49■□□□□ 0.39
CX3CR1P49238 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CX3CR1P49238 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CX3CR1P49238 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.49■□□□□ 0.39
CX3CR1P49238 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CX3CR1P49238 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.49■□□□□ 0.39
CX3CR1P49238 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CX3CR1P49238 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CX3CR1P49238 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.49■□□□□ 0.39
CX3CR1P49238 AC022517.1-201ENST00000592429 346 ntBASIC17.49■□□□□ 0.39
CX3CR1P49238 CYP2T3P-201ENST00000601990 817 ntBASIC17.49■□□□□ 0.39
CX3CR1P49238 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.49■□□□□ 0.39
CX3CR1P49238 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.49■□□□□ 0.39
CX3CR1P49238 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CX3CR1P49238 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CX3CR1P49238 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CX3CR1P49238 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.49■□□□□ 0.39
CX3CR1P49238 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.49■□□□□ 0.39
CX3CR1P49238 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CX3CR1P49238 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.49■□□□□ 0.39
CX3CR1P49238 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CX3CR1P49238 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CX3CR1P49238 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CX3CR1P49238 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CX3CR1P49238 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CX3CR1P49238 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CX3CR1P49238 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.48■□□□□ 0.39
CX3CR1P49238 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CX3CR1P49238 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CX3CR1P49238 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CX3CR1P49238 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CX3CR1P49238 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.48■□□□□ 0.39
CX3CR1P49238 AL355472.2-201ENST00000422958 438 ntBASIC17.48■□□□□ 0.39
CX3CR1P49238 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CX3CR1P49238 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.48■□□□□ 0.39
CX3CR1P49238 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.48■□□□□ 0.39
CX3CR1P49238 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CX3CR1P49238 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CX3CR1P49238 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CX3CR1P49238 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.48■□□□□ 0.39
CX3CR1P49238 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CX3CR1P49238 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.48■□□□□ 0.39
CX3CR1P49238 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.48■□□□□ 0.39
CX3CR1P49238 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.48■□□□□ 0.39
CX3CR1P49238 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.48■□□□□ 0.39
CX3CR1P49238 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.48■□□□□ 0.39
CX3CR1P49238 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.48■□□□□ 0.39
CX3CR1P49238 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CX3CR1P49238 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.47■□□□□ 0.39
CX3CR1P49238 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CX3CR1P49238 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CX3CR1P49238 OR10C1-204ENST00000622521 1039 ntBASIC17.47■□□□□ 0.39
CX3CR1P49238 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CX3CR1P49238 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.47■□□□□ 0.39
CX3CR1P49238 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.47■□□□□ 0.39
CX3CR1P49238 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.47■□□□□ 0.39
CX3CR1P49238 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.47■□□□□ 0.39
CX3CR1P49238 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.47■□□□□ 0.39
CX3CR1P49238 PTBP1P-201ENST00000554374 1601 ntBASIC17.47■□□□□ 0.39
CX3CR1P49238 TMEM179-206ENST00000616017 1645 ntBASIC17.47■□□□□ 0.39
CX3CR1P49238 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CR1P49238 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CX3CR1P49238 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CR1P49238 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CR1P49238 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CR1P49238 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CR1P49238 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CR1P49238 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CR1P49238 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.46■□□□□ 0.39
CX3CR1P49238 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CR1P49238 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
CX3CR1P49238 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CR1P49238 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CX3CR1P49238 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.46■□□□□ 0.39
CX3CR1P49238 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CR1P49238 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CR1P49238 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CX3CR1P49238 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CR1P49238 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms