Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
MMP13P45452 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MMP13P45452 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP13P45452 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
MMP13P45452 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
MMP13P45452 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP13P45452 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MMP13P45452 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
MMP13P45452 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
MMP13P45452 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 AP000974.1-201ENST00000623909 2387 ntBASIC20.71■□□□□ 0.91
MMP13P45452 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
MMP13P45452 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.71■□□□□ 0.91
MMP13P45452 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.71■□□□□ 0.91
MMP13P45452 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.71■□□□□ 0.91
MMP13P45452 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
MMP13P45452 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.71■□□□□ 0.91
MMP13P45452 AL158211.5-201ENST00000623583 2518 ntBASIC20.71■□□□□ 0.91
MMP13P45452 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
MMP13P45452 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
MMP13P45452 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP13P45452 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
MMP13P45452 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP13P45452 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP13P45452 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP13P45452 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.7■□□□□ 0.9
MMP13P45452 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
MMP13P45452 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.7■□□□□ 0.9
MMP13P45452 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP13P45452 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.7■□□□□ 0.9
MMP13P45452 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.7■□□□□ 0.9
MMP13P45452 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.7■□□□□ 0.9
MMP13P45452 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.7■□□□□ 0.9
MMP13P45452 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.7■□□□□ 0.9
MMP13P45452 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP13P45452 AC105020.6-201ENST00000621523 1217 ntBASIC20.7■□□□□ 0.9
MMP13P45452 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.7■□□□□ 0.9
MMP13P45452 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.7■□□□□ 0.9
MMP13P45452 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.7■□□□□ 0.9
MMP13P45452 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP13P45452 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP13P45452 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP13P45452 TNXA-203ENST00000507684 2038 ntBASIC20.7■□□□□ 0.9
MMP13P45452 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.7■□□□□ 0.9
MMP13P45452 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP13P45452 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.69■□□□□ 0.9
MMP13P45452 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP13P45452 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MMP13P45452 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MMP13P45452 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
MMP13P45452 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.69■□□□□ 0.9
MMP13P45452 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.69■□□□□ 0.9
MMP13P45452 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.69■□□□□ 0.9
MMP13P45452 AL589743.5-201ENST00000616611 1050 ntBASIC20.69■□□□□ 0.9
MMP13P45452 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.69■□□□□ 0.9
MMP13P45452 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MMP13P45452 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP13P45452 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP13P45452 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
MMP13P45452 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP13P45452 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MMP13P45452 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MMP13P45452 KRT17P1-201ENST00000399211 1546 ntBASIC20.68■□□□□ 0.9
MMP13P45452 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP13P45452 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
MMP13P45452 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MMP13P45452 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MMP13P45452 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
MMP13P45452 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
MMP13P45452 SLC29A4P1-201ENST00000398760 971 ntBASIC20.68■□□□□ 0.9
MMP13P45452 BX276092.2-201ENST00000417668 665 ntBASIC20.68■□□□□ 0.9
MMP13P45452 TSPY6P-201ENST00000448518 926 ntBASIC20.68■□□□□ 0.9
MMP13P45452 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MMP13P45452 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP13P45452 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP13P45452 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MMP13P45452 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
MMP13P45452 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP13P45452 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP13P45452 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MMP13P45452 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP13P45452 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP13P45452 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP13P45452 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MMP13P45452 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms