Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC35.56■■■■□ 3.28
NCAPD3P42695 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC35.56■■■■□ 3.28
NCAPD3P42695 AP006587.1-201ENST00000534129 1502 ntBASIC35.56■■■■□ 3.28
NCAPD3P42695 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC35.56■■■■□ 3.28
NCAPD3P42695 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
NCAPD3P42695 KRT8P20-201ENST00000423953 1409 ntBASIC35.55■■■■□ 3.28
NCAPD3P42695 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC35.55■■■■□ 3.28
NCAPD3P42695 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
NCAPD3P42695 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
NCAPD3P42695 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
NCAPD3P42695 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC35.55■■■■□ 3.28
NCAPD3P42695 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC35.55■■■■□ 3.28
NCAPD3P42695 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
NCAPD3P42695 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC35.55■■■■□ 3.28
NCAPD3P42695 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
NCAPD3P42695 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
NCAPD3P42695 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC35.54■■■■□ 3.28
NCAPD3P42695 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC35.54■■■■□ 3.28
NCAPD3P42695 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC35.54■■■■□ 3.28
NCAPD3P42695 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC35.54■■■■□ 3.28
NCAPD3P42695 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
NCAPD3P42695 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC35.54■■■■□ 3.28
NCAPD3P42695 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
NCAPD3P42695 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC35.54■■■■□ 3.28
NCAPD3P42695 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC35.54■■■■□ 3.28
NCAPD3P42695 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC35.54■■■■□ 3.28
NCAPD3P42695 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC35.54■■■■□ 3.28
NCAPD3P42695 DAP-202ENST00000432074 1048 ntTSL 2 BASIC35.54■■■■□ 3.28
NCAPD3P42695 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
NCAPD3P42695 AL691432.3-201ENST00000621860 400 ntBASIC35.54■■■■□ 3.28
NCAPD3P42695 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC35.54■■■■□ 3.28
NCAPD3P42695 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
NCAPD3P42695 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
NCAPD3P42695 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC35.53■■■■□ 3.28
NCAPD3P42695 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC35.53■■■■□ 3.28
NCAPD3P42695 STK25-204ENST00000405585 1643 ntTSL 2 BASIC35.53■■■■□ 3.28
NCAPD3P42695 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
NCAPD3P42695 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC35.53■■■■□ 3.28
NCAPD3P42695 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
NCAPD3P42695 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
NCAPD3P42695 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC35.53■■■■□ 3.28
NCAPD3P42695 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
NCAPD3P42695 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
NCAPD3P42695 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
NCAPD3P42695 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC35.53■■■■□ 3.28
NCAPD3P42695 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC35.53■■■■□ 3.28
NCAPD3P42695 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC35.53■■■■□ 3.28
NCAPD3P42695 AC012313.10-201ENST00000623509 926 ntBASIC35.53■■■■□ 3.28
NCAPD3P42695 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC35.53■■■■□ 3.28
NCAPD3P42695 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
NCAPD3P42695 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC35.52■■■■□ 3.28
NCAPD3P42695 AL359075.1-203ENST00000462729 1002 ntBASIC35.52■■■■□ 3.28
NCAPD3P42695 AL441883.1-201ENST00000566170 1045 ntBASIC35.52■■■■□ 3.28
NCAPD3P42695 AC011298.2-201ENST00000617989 482 ntBASIC35.52■■■■□ 3.28
NCAPD3P42695 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
NCAPD3P42695 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC35.52■■■■□ 3.28
NCAPD3P42695 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
NCAPD3P42695 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC35.51■■■■□ 3.28
NCAPD3P42695 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
NCAPD3P42695 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
NCAPD3P42695 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
NCAPD3P42695 KRT18P38-201ENST00000449496 1282 ntBASIC35.51■■■■□ 3.28
NCAPD3P42695 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC35.51■■■■□ 3.28
NCAPD3P42695 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC35.51■■■■□ 3.28
NCAPD3P42695 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC35.51■■■■□ 3.28
NCAPD3P42695 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
NCAPD3P42695 C1orf229-201ENST00000623686 2258 ntBASIC35.51■■■■□ 3.27
NCAPD3P42695 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
NCAPD3P42695 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
NCAPD3P42695 AC246785.2-201ENST00000432512 513 ntBASIC35.5■■■■□ 3.27
NCAPD3P42695 PTPA-216ENST00000432651 857 ntTSL 2 BASIC35.5■■■■□ 3.27
NCAPD3P42695 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC35.5■■■■□ 3.27
NCAPD3P42695 CYGB-204ENST00000589342 815 ntTSL 3 BASIC35.5■■■■□ 3.27
NCAPD3P42695 AC083849.1-201ENST00000615227 514 ntBASIC35.5■■■■□ 3.27
NCAPD3P42695 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
NCAPD3P42695 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC35.5■■■■□ 3.27
NCAPD3P42695 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
NCAPD3P42695 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC35.5■■■■□ 3.27
NCAPD3P42695 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
NCAPD3P42695 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
NCAPD3P42695 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
NCAPD3P42695 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
NCAPD3P42695 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC35.49■■■■□ 3.27
NCAPD3P42695 GXYLT1P6-201ENST00000456472 1187 ntBASIC35.49■■■■□ 3.27
NCAPD3P42695 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC35.49■■■■□ 3.27
NCAPD3P42695 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC35.49■■■■□ 3.27
NCAPD3P42695 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC35.49■■■■□ 3.27
NCAPD3P42695 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
NCAPD3P42695 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC35.49■■■■□ 3.27
NCAPD3P42695 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC35.49■■■■□ 3.27
NCAPD3P42695 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
NCAPD3P42695 ME2-206ENST00000638410 2289 ntTSL 5 BASIC35.49■■■■□ 3.27
NCAPD3P42695 ME2-210ENST00000639255 2262 ntTSL 5 BASIC35.49■■■■□ 3.27
NCAPD3P42695 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
NCAPD3P42695 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
NCAPD3P42695 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
NCAPD3P42695 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC35.49■■■■□ 3.27
NCAPD3P42695 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
NCAPD3P42695 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC35.48■■■■□ 3.27
NCAPD3P42695 PVRIG2P-201ENST00000435460 978 ntBASIC35.48■■■■□ 3.27
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms