Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
KDM5CP41229 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC30.07■■■□□ 2.4
KDM5CP41229 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
KDM5CP41229 SAPCD2P2-201ENST00000431719 1174 ntBASIC30.07■■■□□ 2.4
KDM5CP41229 ATP5G1P1-201ENST00000448724 379 ntBASIC30.07■■■□□ 2.4
KDM5CP41229 AC011506.1-201ENST00000474329 610 ntBASIC30.07■■■□□ 2.4
KDM5CP41229 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC30.07■■■□□ 2.4
KDM5CP41229 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC30.07■■■□□ 2.4
KDM5CP41229 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC30.07■■■□□ 2.4
KDM5CP41229 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
KDM5CP41229 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
KDM5CP41229 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
KDM5CP41229 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
KDM5CP41229 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC30.07■■■□□ 2.4
KDM5CP41229 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
KDM5CP41229 CALM3-202ENST00000391918 702 ntTSL 2 BASIC30.07■■■□□ 2.4
KDM5CP41229 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC30.07■■■□□ 2.4
KDM5CP41229 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
KDM5CP41229 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC30.07■■■□□ 2.4
KDM5CP41229 GRAMD4P8-201ENST00000605465 1115 ntBASIC30.07■■■□□ 2.4
KDM5CP41229 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
KDM5CP41229 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC30.07■■■□□ 2.4
KDM5CP41229 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC30.06■■■□□ 2.4
KDM5CP41229 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC30.06■■■□□ 2.4
KDM5CP41229 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
KDM5CP41229 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
KDM5CP41229 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
KDM5CP41229 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
KDM5CP41229 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
KDM5CP41229 COPS8-203ENST00000409334 794 ntTSL 5 BASIC30.06■■■□□ 2.4
KDM5CP41229 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC30.06■■■□□ 2.4
KDM5CP41229 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC30.06■■■□□ 2.4
KDM5CP41229 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
KDM5CP41229 LINC01238-205ENST00000567549 1107 ntBASIC30.06■■■□□ 2.4
KDM5CP41229 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
KDM5CP41229 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
KDM5CP41229 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC30.05■■■□□ 2.4
KDM5CP41229 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
KDM5CP41229 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
KDM5CP41229 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
KDM5CP41229 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
KDM5CP41229 DUSP5P1-201ENST00000441325 1139 ntBASIC30.05■■■□□ 2.4
KDM5CP41229 AC009947.2-201ENST00000444014 672 ntBASIC30.05■■■□□ 2.4
KDM5CP41229 AC128688.1-201ENST00000487626 519 ntBASIC30.05■■■□□ 2.4
KDM5CP41229 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
KDM5CP41229 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC30.05■■■□□ 2.4
KDM5CP41229 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
KDM5CP41229 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC30.05■■■□□ 2.4
KDM5CP41229 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
KDM5CP41229 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
KDM5CP41229 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
KDM5CP41229 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
KDM5CP41229 HMGA1P5-201ENST00000412453 271 ntBASIC30.04■■■□□ 2.4
KDM5CP41229 YBX1P10-201ENST00000444752 975 ntBASIC30.04■■■□□ 2.4
KDM5CP41229 AC091390.4-202ENST00000476426 537 ntBASIC30.04■■■□□ 2.4
KDM5CP41229 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC30.03■■■□□ 2.4
KDM5CP41229 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC30.03■■■□□ 2.4
KDM5CP41229 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
KDM5CP41229 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
KDM5CP41229 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
KDM5CP41229 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC30.03■■■□□ 2.4
KDM5CP41229 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
KDM5CP41229 AL138966.2-201ENST00000621997 464 ntBASIC30.03■■■□□ 2.4
KDM5CP41229 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
KDM5CP41229 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC30.03■■■□□ 2.4
KDM5CP41229 COPE-203ENST00000351079 907 ntTSL 2 BASIC30.03■■■□□ 2.4
KDM5CP41229 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC30.03■■■□□ 2.4
KDM5CP41229 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
KDM5CP41229 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
KDM5CP41229 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
KDM5CP41229 KRT8P20-201ENST00000423953 1409 ntBASIC30.02■■■□□ 2.4
KDM5CP41229 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC30.02■■■□□ 2.4
KDM5CP41229 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC30.02■■■□□ 2.4
KDM5CP41229 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC30.02■■■□□ 2.4
KDM5CP41229 AC096733.2-201ENST00000609937 1394 ntBASIC30.02■■■□□ 2.4
KDM5CP41229 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
KDM5CP41229 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC30.02■■■□□ 2.4
KDM5CP41229 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
KDM5CP41229 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC30.02■■■□□ 2.4
KDM5CP41229 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
KDM5CP41229 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC30.02■■■□□ 2.4
KDM5CP41229 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC30.02■■■□□ 2.4
KDM5CP41229 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
KDM5CP41229 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
KDM5CP41229 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.4
KDM5CP41229 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
KDM5CP41229 HLA-G-202ENST00000376815 851 ntBASIC30.01■■■□□ 2.39
KDM5CP41229 HLA-G-203ENST00000376818 1127 ntBASIC30.01■■■□□ 2.39
KDM5CP41229 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
KDM5CP41229 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC30.01■■■□□ 2.39
KDM5CP41229 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
KDM5CP41229 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC30■■■□□ 2.39
KDM5CP41229 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC30■■■□□ 2.39
KDM5CP41229 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
KDM5CP41229 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC30■■■□□ 2.39
KDM5CP41229 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC30■■■□□ 2.39
KDM5CP41229 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC30■■■□□ 2.39
KDM5CP41229 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC30■■■□□ 2.39
KDM5CP41229 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC30■■■□□ 2.39
KDM5CP41229 AP000550.4-202ENST00000639755 178 ntBASIC30■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms