Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.66□□□□□ -0.06
CKS2P33552 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.66□□□□□ -0.06
CKS2P33552 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.66□□□□□ -0.06
CKS2P33552 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.66□□□□□ -0.06
CKS2P33552 SLC47A1P1-202ENST00000449666 945 ntBASIC14.66□□□□□ -0.06
CKS2P33552 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.66□□□□□ -0.06
CKS2P33552 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.66□□□□□ -0.06
CKS2P33552 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CKS2P33552 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 AL691432.2-201ENST00000607222 2038 ntBASIC14.66□□□□□ -0.06
CKS2P33552 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CKS2P33552 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.66□□□□□ -0.06
CKS2P33552 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS2P33552 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CKS2P33552 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.65□□□□□ -0.06
CKS2P33552 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.65□□□□□ -0.06
CKS2P33552 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.65□□□□□ -0.06
CKS2P33552 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS2P33552 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS2P33552 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.65□□□□□ -0.06
CKS2P33552 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS2P33552 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS2P33552 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CKS2P33552 AL356740.2-201ENST00000601559 647 ntBASIC14.65□□□□□ -0.06
CKS2P33552 AL138724.1-201ENST00000606771 1088 ntBASIC14.65□□□□□ -0.06
CKS2P33552 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CKS2P33552 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS2P33552 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CKS2P33552 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.65□□□□□ -0.06
CKS2P33552 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.65□□□□□ -0.06
CKS2P33552 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS2P33552 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.65□□□□□ -0.06
CKS2P33552 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.65□□□□□ -0.06
CKS2P33552 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS2P33552 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.65□□□□□ -0.06
CKS2P33552 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKS2P33552 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKS2P33552 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.64□□□□□ -0.07
CKS2P33552 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKS2P33552 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CKS2P33552 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.64□□□□□ -0.07
CKS2P33552 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.64□□□□□ -0.07
CKS2P33552 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CKS2P33552 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.64□□□□□ -0.07
CKS2P33552 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CKS2P33552 TREX1-205ENST00000625293 1783 ntBASIC14.64□□□□□ -0.07
CKS2P33552 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKS2P33552 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKS2P33552 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CKS2P33552 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKS2P33552 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CKS2P33552 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKS2P33552 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CKS2P33552 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.64□□□□□ -0.07
CKS2P33552 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKS2P33552 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
CKS2P33552 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
CKS2P33552 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.63□□□□□ -0.07
CKS2P33552 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.63□□□□□ -0.07
CKS2P33552 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.63□□□□□ -0.07
CKS2P33552 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.63□□□□□ -0.07
CKS2P33552 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 MIR2861-201ENST00000636310 90 ntBASIC14.63□□□□□ -0.07
CKS2P33552 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.63□□□□□ -0.07
CKS2P33552 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms