Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 PGM5P4-201ENST00000421970 445 ntBASIC18.49■□□□□ 0.55
TNFRSF1BP20333 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 AL591742.1-201ENST00000604433 565 ntBASIC18.49■□□□□ 0.55
TNFRSF1BP20333 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 PTBP1P-201ENST00000554374 1601 ntBASIC18.49■□□□□ 0.55
TNFRSF1BP20333 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF1BP20333 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 NTF6G-201ENST00000591094 616 ntBASIC18.48■□□□□ 0.55
TNFRSF1BP20333 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.48■□□□□ 0.55
TNFRSF1BP20333 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.47■□□□□ 0.55
TNFRSF1BP20333 AC004408.2-201ENST00000623613 2777 ntBASIC18.47■□□□□ 0.55
TNFRSF1BP20333 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF1BP20333 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.46■□□□□ 0.54
TNFRSF1BP20333 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFRSF1BP20333 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TNFRSF1BP20333 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms