Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF4P18848 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATF4P18848 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF4P18848 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF4P18848 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.61■□□□□ 0.25
ATF4P18848 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.61■□□□□ 0.25
ATF4P18848 AC241377.3-202ENST00000626088 1088 ntBASIC16.61■□□□□ 0.25
ATF4P18848 AC241585.3-202ENST00000628937 1088 ntBASIC16.61■□□□□ 0.25
ATF4P18848 AC245100.8-202ENST00000629247 1058 ntBASIC16.61■□□□□ 0.25
ATF4P18848 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.61■□□□□ 0.25
ATF4P18848 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.61■□□□□ 0.25
ATF4P18848 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
ATF4P18848 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.61■□□□□ 0.25
ATF4P18848 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATF4P18848 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ATF4P18848 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
ATF4P18848 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
ATF4P18848 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF4P18848 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF4P18848 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF4P18848 PRORSD1P-202ENST00000563365 2154 ntBASIC16.61■□□□□ 0.25
ATF4P18848 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ATF4P18848 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF4P18848 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.6■□□□□ 0.25
ATF4P18848 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.6■□□□□ 0.25
ATF4P18848 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.6■□□□□ 0.25
ATF4P18848 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
ATF4P18848 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.6■□□□□ 0.25
ATF4P18848 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.6■□□□□ 0.25
ATF4P18848 CA15P2-201ENST00000611168 834 ntBASIC16.6■□□□□ 0.25
ATF4P18848 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.6■□□□□ 0.25
ATF4P18848 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.6■□□□□ 0.25
ATF4P18848 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
ATF4P18848 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.6■□□□□ 0.25
ATF4P18848 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.6■□□□□ 0.25
ATF4P18848 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.6■□□□□ 0.25
ATF4P18848 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ATF4P18848 AC079598.2-202ENST00000546624 1451 ntBASIC16.6■□□□□ 0.25
ATF4P18848 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.6■□□□□ 0.25
ATF4P18848 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ATF4P18848 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF4P18848 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.59■□□□□ 0.25
ATF4P18848 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATF4P18848 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATF4P18848 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATF4P18848 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
ATF4P18848 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATF4P18848 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATF4P18848 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATF4P18848 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.59■□□□□ 0.25
ATF4P18848 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.59■□□□□ 0.25
ATF4P18848 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.59■□□□□ 0.25
ATF4P18848 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
ATF4P18848 MIR4466-201ENST00000606121 54 ntBASIC16.59■□□□□ 0.25
ATF4P18848 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.59■□□□□ 0.25
ATF4P18848 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ATF4P18848 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.59■□□□□ 0.25
ATF4P18848 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATF4P18848 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATF4P18848 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ATF4P18848 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
ATF4P18848 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATF4P18848 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATF4P18848 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.58■□□□□ 0.25
ATF4P18848 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATF4P18848 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATF4P18848 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ATF4P18848 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATF4P18848 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATF4P18848 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATF4P18848 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
ATF4P18848 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATF4P18848 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ATF4P18848 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATF4P18848 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATF4P18848 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.58■□□□□ 0.24
ATF4P18848 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATF4P18848 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.58■□□□□ 0.24
ATF4P18848 AL499627.2-201ENST00000606283 725 ntBASIC16.58■□□□□ 0.24
ATF4P18848 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.58■□□□□ 0.24
ATF4P18848 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATF4P18848 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATF4P18848 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATF4P18848 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATF4P18848 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms