Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.14■□□□□ 0.49
FREM3P0C091 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
FREM3P0C091 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.14■□□□□ 0.49
FREM3P0C091 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
FREM3P0C091 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FREM3P0C091 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FREM3P0C091 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FREM3P0C091 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FREM3P0C091 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FREM3P0C091 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.14■□□□□ 0.49
FREM3P0C091 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
FREM3P0C091 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FREM3P0C091 AL121906.2-201ENST00000621597 723 ntBASIC18.14■□□□□ 0.49
FREM3P0C091 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FREM3P0C091 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
FREM3P0C091 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.14■□□□□ 0.49
FREM3P0C091 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
FREM3P0C091 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.14■□□□□ 0.49
FREM3P0C091 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FREM3P0C091 SMG8-203ENST00000578922 2178 ntBASIC18.13■□□□□ 0.49
FREM3P0C091 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
FREM3P0C091 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.13■□□□□ 0.49
FREM3P0C091 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.13■□□□□ 0.49
FREM3P0C091 AC124016.1-201ENST00000609552 612 ntBASIC18.13■□□□□ 0.49
FREM3P0C091 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.13■□□□□ 0.49
FREM3P0C091 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FREM3P0C091 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
FREM3P0C091 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
FREM3P0C091 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FREM3P0C091 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
FREM3P0C091 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FREM3P0C091 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FREM3P0C091 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FREM3P0C091 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.13■□□□□ 0.49
FREM3P0C091 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
FREM3P0C091 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FREM3P0C091 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.13■□□□□ 0.49
FREM3P0C091 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
FREM3P0C091 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.13■□□□□ 0.49
FREM3P0C091 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.13■□□□□ 0.49
FREM3P0C091 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FREM3P0C091 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.13■□□□□ 0.49
FREM3P0C091 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
FREM3P0C091 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.13■□□□□ 0.49
FREM3P0C091 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.13■□□□□ 0.49
FREM3P0C091 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FREM3P0C091 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.13■□□□□ 0.49
FREM3P0C091 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
FREM3P0C091 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FREM3P0C091 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FREM3P0C091 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FREM3P0C091 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FREM3P0C091 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.12■□□□□ 0.49
FREM3P0C091 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
FREM3P0C091 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FREM3P0C091 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
FREM3P0C091 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FREM3P0C091 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
FREM3P0C091 AC133681.1-201ENST00000465482 601 ntBASIC18.12■□□□□ 0.49
FREM3P0C091 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
FREM3P0C091 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.12■□□□□ 0.49
FREM3P0C091 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
FREM3P0C091 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.12■□□□□ 0.49
FREM3P0C091 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FREM3P0C091 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FREM3P0C091 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FREM3P0C091 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
FREM3P0C091 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FREM3P0C091 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
FREM3P0C091 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
FREM3P0C091 AL512408.1-201ENST00000569378 2000 ntBASIC18.11■□□□□ 0.49
FREM3P0C091 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
FREM3P0C091 AC008550.1-201ENST00000511500 884 ntBASIC18.11■□□□□ 0.49
FREM3P0C091 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.11■□□□□ 0.49
FREM3P0C091 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.11■□□□□ 0.49
FREM3P0C091 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FREM3P0C091 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.11■□□□□ 0.49
FREM3P0C091 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FREM3P0C091 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FREM3P0C091 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FREM3P0C091 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
FREM3P0C091 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FREM3P0C091 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FREM3P0C091 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.11■□□□□ 0.49
FREM3P0C091 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FREM3P0C091 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FREM3P0C091 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FREM3P0C091 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FREM3P0C091 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
FREM3P0C091 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FREM3P0C091 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.11■□□□□ 0.49
FREM3P0C091 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FREM3P0C091 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FREM3P0C091 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FREM3P0C091 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FREM3P0C091 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
FREM3P0C091 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
FREM3P0C091 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FREM3P0C091 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FREM3P0C091 AL390719.1-204ENST00000412397 1219 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms