Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CLTAP09496 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
CLTAP09496 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLTAP09496 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.79■■□□□ 1.08
CLTAP09496 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.79■■□□□ 1.08
CLTAP09496 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.79■■□□□ 1.08
CLTAP09496 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLTAP09496 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CLTAP09496 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLTAP09496 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLTAP09496 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLTAP09496 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLTAP09496 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CLTAP09496 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLTAP09496 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.79■■□□□ 1.08
CLTAP09496 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.79■■□□□ 1.08
CLTAP09496 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLTAP09496 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLTAP09496 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLTAP09496 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CLTAP09496 KRT8P17-201ENST00000453110 1448 ntBASIC21.79■■□□□ 1.08
CLTAP09496 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLTAP09496 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLTAP09496 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLTAP09496 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.78■■□□□ 1.08
CLTAP09496 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLTAP09496 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.78■■□□□ 1.08
CLTAP09496 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CLTAP09496 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
CLTAP09496 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLTAP09496 PRORSD1P-201ENST00000295112 541 ntBASIC21.78■■□□□ 1.08
CLTAP09496 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLTAP09496 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLTAP09496 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLTAP09496 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.78■■□□□ 1.08
CLTAP09496 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
CLTAP09496 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLTAP09496 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.78■■□□□ 1.08
CLTAP09496 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLTAP09496 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLTAP09496 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.78■■□□□ 1.08
CLTAP09496 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.78■■□□□ 1.08
CLTAP09496 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLTAP09496 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLTAP09496 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.77■■□□□ 1.08
CLTAP09496 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLTAP09496 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CLTAP09496 LINC01521-201ENST00000504184 1943 ntBASIC21.77■■□□□ 1.08
CLTAP09496 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.77■■□□□ 1.08
CLTAP09496 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLTAP09496 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.77■■□□□ 1.08
CLTAP09496 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLTAP09496 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLTAP09496 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLTAP09496 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLTAP09496 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLTAP09496 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.77■■□□□ 1.07
CLTAP09496 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLTAP09496 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLTAP09496 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CLTAP09496 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLTAP09496 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLTAP09496 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.76■■□□□ 1.07
CLTAP09496 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLTAP09496 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.76■■□□□ 1.07
CLTAP09496 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.76■■□□□ 1.07
CLTAP09496 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLTAP09496 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLTAP09496 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLTAP09496 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLTAP09496 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.76■■□□□ 1.07
CLTAP09496 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLTAP09496 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLTAP09496 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CLTAP09496 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CLTAP09496 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.75■■□□□ 1.07
CLTAP09496 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLTAP09496 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLTAP09496 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.75■■□□□ 1.07
CLTAP09496 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CLTAP09496 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.75■■□□□ 1.07
CLTAP09496 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLTAP09496 AC069544.1-201ENST00000609399 999 ntBASIC21.75■■□□□ 1.07
CLTAP09496 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLTAP09496 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLTAP09496 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CLTAP09496 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLTAP09496 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLTAP09496 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLTAP09496 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLTAP09496 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CLTAP09496 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CLTAP09496 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLTAP09496 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLTAP09496 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.74■■□□□ 1.07
CLTAP09496 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.74■■□□□ 1.07
CLTAP09496 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLTAP09496 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLTAP09496 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.74■■□□□ 1.07
CLTAP09496 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms