Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ERCC1P07992 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ERCC1P07992 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ERCC1P07992 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ERCC1P07992 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC1P07992 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.62■□□□□ 0.41
ERCC1P07992 AC093787.1-201ENST00000450396 207 ntBASIC17.62■□□□□ 0.41
ERCC1P07992 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.62■□□□□ 0.41
ERCC1P07992 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC1P07992 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC1P07992 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC1P07992 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC1P07992 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC1P07992 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 AC010980.2-201ENST00000587099 1412 ntBASIC17.62■□□□□ 0.41
ERCC1P07992 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC1P07992 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC1P07992 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC1P07992 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC1P07992 AC116050.2-201ENST00000612102 1779 ntBASIC17.61■□□□□ 0.41
ERCC1P07992 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC1P07992 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC1P07992 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC1P07992 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC1P07992 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.61■□□□□ 0.41
ERCC1P07992 AC097658.1-201ENST00000475555 843 ntBASIC17.61■□□□□ 0.41
ERCC1P07992 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.61■□□□□ 0.41
ERCC1P07992 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC1P07992 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC1P07992 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.61■□□□□ 0.41
ERCC1P07992 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC1P07992 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC1P07992 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC1P07992 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC1P07992 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC1P07992 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC1P07992 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC1P07992 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
ERCC1P07992 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.6■□□□□ 0.41
ERCC1P07992 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.6■□□□□ 0.41
ERCC1P07992 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.6■□□□□ 0.41
ERCC1P07992 AC007322.3-201ENST00000426526 701 ntBASIC17.6■□□□□ 0.41
ERCC1P07992 FAM201B-201ENST00000458407 597 ntBASIC17.6■□□□□ 0.41
ERCC1P07992 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.6■□□□□ 0.41
ERCC1P07992 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.6■□□□□ 0.41
ERCC1P07992 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 AC100791.3-201ENST00000617619 330 ntBASIC17.6■□□□□ 0.41
ERCC1P07992 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ERCC1P07992 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.6■□□□□ 0.41
ERCC1P07992 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ERCC1P07992 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ERCC1P07992 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ERCC1P07992 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.6■□□□□ 0.41
ERCC1P07992 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
ERCC1P07992 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC1P07992 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC1P07992 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.59■□□□□ 0.41
ERCC1P07992 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.59■□□□□ 0.41
ERCC1P07992 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC1P07992 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ERCC1P07992 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
ERCC1P07992 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC1P07992 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms