Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
POLR3DP05423 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
POLR3DP05423 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
POLR3DP05423 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
POLR3DP05423 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
POLR3DP05423 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
POLR3DP05423 AC124283.5-201ENST00000624661 1809 ntBASIC23.84■■□□□ 1.41
POLR3DP05423 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
POLR3DP05423 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
POLR3DP05423 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.84■■□□□ 1.41
POLR3DP05423 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
POLR3DP05423 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
POLR3DP05423 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
POLR3DP05423 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
POLR3DP05423 KRASP1-201ENST00000407852 552 ntBASIC23.84■■□□□ 1.41
POLR3DP05423 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.84■■□□□ 1.41
POLR3DP05423 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
POLR3DP05423 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.84■■□□□ 1.41
POLR3DP05423 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.84■■□□□ 1.41
POLR3DP05423 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.84■■□□□ 1.41
POLR3DP05423 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.84■■□□□ 1.41
POLR3DP05423 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
POLR3DP05423 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.84■■□□□ 1.41
POLR3DP05423 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
POLR3DP05423 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
POLR3DP05423 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
POLR3DP05423 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
POLR3DP05423 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
POLR3DP05423 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
POLR3DP05423 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
POLR3DP05423 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
POLR3DP05423 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
POLR3DP05423 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
POLR3DP05423 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
POLR3DP05423 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
POLR3DP05423 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
POLR3DP05423 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.83■■□□□ 1.41
POLR3DP05423 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.83■■□□□ 1.41
POLR3DP05423 PRKY-204ENST00000533551 1019 ntBASIC23.83■■□□□ 1.41
POLR3DP05423 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.83■■□□□ 1.41
POLR3DP05423 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.83■■□□□ 1.41
POLR3DP05423 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.83■■□□□ 1.41
POLR3DP05423 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
POLR3DP05423 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
POLR3DP05423 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.83■■□□□ 1.4
POLR3DP05423 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.83■■□□□ 1.4
POLR3DP05423 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.82■■□□□ 1.4
POLR3DP05423 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.82■■□□□ 1.4
POLR3DP05423 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
POLR3DP05423 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.82■■□□□ 1.4
POLR3DP05423 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
POLR3DP05423 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
POLR3DP05423 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
POLR3DP05423 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
POLR3DP05423 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
POLR3DP05423 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
POLR3DP05423 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.82■■□□□ 1.4
POLR3DP05423 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.82■■□□□ 1.4
POLR3DP05423 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.82■■□□□ 1.4
POLR3DP05423 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.82■■□□□ 1.4
POLR3DP05423 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
POLR3DP05423 AL031963.3-201ENST00000606441 850 ntBASIC23.82■■□□□ 1.4
POLR3DP05423 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
POLR3DP05423 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.82■■□□□ 1.4
POLR3DP05423 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
POLR3DP05423 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
POLR3DP05423 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.82■■□□□ 1.4
POLR3DP05423 KRT8P20-201ENST00000423953 1409 ntBASIC23.82■■□□□ 1.4
POLR3DP05423 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.82■■□□□ 1.4
POLR3DP05423 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
POLR3DP05423 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR3DP05423 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR3DP05423 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR3DP05423 DPP3P2-201ENST00000416030 1696 ntBASIC23.81■■□□□ 1.4
POLR3DP05423 AL596275.1-201ENST00000423464 877 ntBASIC23.81■■□□□ 1.4
POLR3DP05423 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
POLR3DP05423 AC133681.1-201ENST00000465482 601 ntBASIC23.81■■□□□ 1.4
POLR3DP05423 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
POLR3DP05423 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.81■■□□□ 1.4
POLR3DP05423 AC073314.1-201ENST00000568729 2216 ntBASIC23.81■■□□□ 1.4
POLR3DP05423 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
POLR3DP05423 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR3DP05423 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR3DP05423 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR3DP05423 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
POLR3DP05423 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR3DP05423 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.81■■□□□ 1.4
POLR3DP05423 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR3DP05423 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
POLR3DP05423 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR3DP05423 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR3DP05423 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
POLR3DP05423 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR3DP05423 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
POLR3DP05423 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR3DP05423 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR3DP05423 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR3DP05423 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
POLR3DP05423 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
POLR3DP05423 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms