Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-AP01891 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-AP01891 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-AP01891 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-AP01891 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HLA-AP01891 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-AP01891 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HLA-AP01891 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
HLA-AP01891 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-AP01891 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-AP01891 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
HLA-AP01891 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-AP01891 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-AP01891 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-AP01891 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
HLA-AP01891 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-AP01891 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-AP01891 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.79■□□□□ 0.28
HLA-AP01891 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HLA-AP01891 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-AP01891 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-AP01891 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HLA-AP01891 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HLA-AP01891 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HLA-AP01891 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
HLA-AP01891 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-AP01891 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-AP01891 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-AP01891 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-AP01891 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-AP01891 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-AP01891 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HLA-AP01891 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HLA-AP01891 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HLA-AP01891 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-AP01891 AC007613.1-201ENST00000572811 2597 ntBASIC16.78■□□□□ 0.28
HLA-AP01891 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HLA-AP01891 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-AP01891 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-AP01891 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-AP01891 AL031432.3-201ENST00000607698 485 ntBASIC16.78■□□□□ 0.28
HLA-AP01891 MIR2861-201ENST00000636310 90 ntBASIC16.78■□□□□ 0.28
HLA-AP01891 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-AP01891 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-AP01891 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-AP01891 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-AP01891 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-AP01891 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-AP01891 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-AP01891 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-AP01891 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-AP01891 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-AP01891 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HLA-AP01891 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HLA-AP01891 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-AP01891 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-AP01891 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-AP01891 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-AP01891 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-AP01891 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HLA-AP01891 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-AP01891 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-AP01891 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-AP01891 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-AP01891 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HLA-AP01891 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-AP01891 AC027682.1-201ENST00000562846 899 ntBASIC16.77■□□□□ 0.28
HLA-AP01891 AC142381.2-201ENST00000566120 298 ntBASIC16.77■□□□□ 0.28
HLA-AP01891 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-AP01891 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-AP01891 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-AP01891 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-AP01891 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-AP01891 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-AP01891 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-AP01891 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HLA-AP01891 AC061975.6-201ENST00000579045 1553 ntBASIC16.77■□□□□ 0.27
HLA-AP01891 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.77■□□□□ 0.27
HLA-AP01891 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
HLA-AP01891 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-AP01891 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.76■□□□□ 0.27
HLA-AP01891 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.76■□□□□ 0.27
HLA-AP01891 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-AP01891 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-AP01891 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HLA-AP01891 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms