Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 SLC29A4P1-201ENST00000398760 971 ntBASIC17.85■□□□□ 0.45
UBL3O95164 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.85■□□□□ 0.45
UBL3O95164 NCF1B-203ENST00000435988 1254 ntBASIC17.85■□□□□ 0.45
UBL3O95164 AC093787.1-201ENST00000450396 207 ntBASIC17.85■□□□□ 0.45
UBL3O95164 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
UBL3O95164 AC083906.2-201ENST00000511578 360 ntBASIC17.85■□□□□ 0.45
UBL3O95164 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.85■□□□□ 0.45
UBL3O95164 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.85■□□□□ 0.45
UBL3O95164 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.85■□□□□ 0.45
UBL3O95164 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.85■□□□□ 0.45
UBL3O95164 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.85■□□□□ 0.45
UBL3O95164 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.85■□□□□ 0.45
UBL3O95164 FP700111.2-201ENST00000619190 1892 ntBASIC17.85■□□□□ 0.45
UBL3O95164 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBL3O95164 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.84■□□□□ 0.45
UBL3O95164 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL3O95164 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.84■□□□□ 0.45
UBL3O95164 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBL3O95164 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL3O95164 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
UBL3O95164 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
UBL3O95164 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
UBL3O95164 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBL3O95164 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL3O95164 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.84■□□□□ 0.45
UBL3O95164 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.84■□□□□ 0.45
UBL3O95164 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
UBL3O95164 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.84■□□□□ 0.45
UBL3O95164 CYP2T3P-201ENST00000601990 817 ntBASIC17.84■□□□□ 0.45
UBL3O95164 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.84■□□□□ 0.45
UBL3O95164 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL3O95164 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL3O95164 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL3O95164 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
UBL3O95164 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
UBL3O95164 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL3O95164 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL3O95164 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
UBL3O95164 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.83■□□□□ 0.45
UBL3O95164 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
UBL3O95164 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
UBL3O95164 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL3O95164 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL3O95164 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL3O95164 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL3O95164 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBL3O95164 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.83■□□□□ 0.44
UBL3O95164 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.83■□□□□ 0.44
UBL3O95164 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL3O95164 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.83■□□□□ 0.44
UBL3O95164 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.83■□□□□ 0.44
UBL3O95164 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.83■□□□□ 0.44
UBL3O95164 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
UBL3O95164 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL3O95164 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
UBL3O95164 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL3O95164 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL3O95164 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBL3O95164 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL3O95164 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.83■□□□□ 0.44
UBL3O95164 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.83■□□□□ 0.44
UBL3O95164 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.83■□□□□ 0.44
UBL3O95164 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL3O95164 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL3O95164 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
UBL3O95164 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL3O95164 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.82■□□□□ 0.44
UBL3O95164 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
UBL3O95164 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
UBL3O95164 TCF3P1-201ENST00000423021 1937 ntBASIC17.82■□□□□ 0.44
UBL3O95164 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBL3O95164 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL3O95164 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL3O95164 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
UBL3O95164 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
UBL3O95164 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL3O95164 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
UBL3O95164 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL3O95164 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.82■□□□□ 0.44
UBL3O95164 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL3O95164 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL3O95164 KRT18P68-201ENST00000392293 1000 ntBASIC17.82■□□□□ 0.44
UBL3O95164 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
UBL3O95164 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.82■□□□□ 0.44
UBL3O95164 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms