Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPP40O75818 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPP40O75818 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPP40O75818 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.5■□□□□ 0.87
RPP40O75818 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RPP40O75818 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
RPP40O75818 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
RPP40O75818 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RPP40O75818 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPP40O75818 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPP40O75818 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RPP40O75818 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.49■□□□□ 0.87
RPP40O75818 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPP40O75818 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RPP40O75818 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPP40O75818 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPP40O75818 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.49■□□□□ 0.87
RPP40O75818 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RPP40O75818 AL355075.4-201ENST00000554988 638 ntBASIC20.49■□□□□ 0.87
RPP40O75818 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.49■□□□□ 0.87
RPP40O75818 RARRES2P10-201ENST00000564312 460 ntBASIC20.49■□□□□ 0.87
RPP40O75818 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RPP40O75818 AC006557.6-201ENST00000623071 864 ntBASIC20.49■□□□□ 0.87
RPP40O75818 MIR2861-201ENST00000636310 90 ntBASIC20.49■□□□□ 0.87
RPP40O75818 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.49■□□□□ 0.87
RPP40O75818 LINC01006-201ENST00000333319 2292 ntBASIC20.49■□□□□ 0.87
RPP40O75818 GABARAPL3-202ENST00000624044 1851 ntBASIC20.49■□□□□ 0.87
RPP40O75818 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPP40O75818 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPP40O75818 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPP40O75818 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPP40O75818 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPP40O75818 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPP40O75818 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPP40O75818 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPP40O75818 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPP40O75818 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.48■□□□□ 0.87
RPP40O75818 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPP40O75818 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.48■□□□□ 0.87
RPP40O75818 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPP40O75818 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.48■□□□□ 0.87
RPP40O75818 AC005829.2-201ENST00000571422 1056 ntBASIC20.48■□□□□ 0.87
RPP40O75818 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPP40O75818 AC012306.2-201ENST00000609350 630 ntBASIC20.48■□□□□ 0.87
RPP40O75818 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPP40O75818 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPP40O75818 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RPP40O75818 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPP40O75818 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPP40O75818 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPP40O75818 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPP40O75818 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPP40O75818 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RPP40O75818 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.48■□□□□ 0.87
RPP40O75818 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.48■□□□□ 0.87
RPP40O75818 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPP40O75818 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.47■□□□□ 0.87
RPP40O75818 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPP40O75818 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPP40O75818 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPP40O75818 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RPP40O75818 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPP40O75818 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPP40O75818 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.47■□□□□ 0.87
RPP40O75818 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.47■□□□□ 0.87
RPP40O75818 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.47■□□□□ 0.87
RPP40O75818 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.47■□□□□ 0.87
RPP40O75818 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.47■□□□□ 0.87
RPP40O75818 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
RPP40O75818 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPP40O75818 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.47■□□□□ 0.87
RPP40O75818 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RPP40O75818 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPP40O75818 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPP40O75818 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPP40O75818 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.47■□□□□ 0.87
RPP40O75818 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.47■□□□□ 0.87
RPP40O75818 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPP40O75818 AL121603.2-201ENST00000557373 2117 ntBASIC20.47■□□□□ 0.87
RPP40O75818 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RPP40O75818 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPP40O75818 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RPP40O75818 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.46■□□□□ 0.87
RPP40O75818 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPP40O75818 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPP40O75818 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.46■□□□□ 0.87
RPP40O75818 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPP40O75818 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RPP40O75818 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RPP40O75818 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPP40O75818 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.46■□□□□ 0.87
RPP40O75818 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
RPP40O75818 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.46■□□□□ 0.87
RPP40O75818 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RPP40O75818 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RPP40O75818 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPP40O75818 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPP40O75818 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPP40O75818 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
RPP40O75818 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms