Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP200O75643 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP200O75643 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP200O75643 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP200O75643 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SNRNP200O75643 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP200O75643 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP200O75643 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP200O75643 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP200O75643 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.13■□□□□ 0.65
SNRNP200O75643 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.13■□□□□ 0.65
SNRNP200O75643 AL359736.2-201ENST00000621992 437 ntBASIC19.13■□□□□ 0.65
SNRNP200O75643 FAM197Y4-202ENST00000622692 608 ntBASIC19.13■□□□□ 0.65
SNRNP200O75643 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SNRNP200O75643 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP200O75643 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP200O75643 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP200O75643 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP200O75643 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.13■□□□□ 0.65
SNRNP200O75643 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP200O75643 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SNRNP200O75643 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP200O75643 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP200O75643 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.12■□□□□ 0.65
SNRNP200O75643 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP200O75643 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SNRNP200O75643 AC239809.2-201ENST00000415381 517 ntBASIC19.12■□□□□ 0.65
SNRNP200O75643 AC012618.2-201ENST00000428058 849 ntBASIC19.12■□□□□ 0.65
SNRNP200O75643 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP200O75643 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.12■□□□□ 0.65
SNRNP200O75643 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.12■□□□□ 0.65
SNRNP200O75643 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.12■□□□□ 0.65
SNRNP200O75643 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.12■□□□□ 0.65
SNRNP200O75643 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP200O75643 TCF3P1-201ENST00000423021 1937 ntBASIC19.12■□□□□ 0.65
SNRNP200O75643 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
SNRNP200O75643 PCDHAC2-203ENST00000615316 3011 ntBASIC19.12■□□□□ 0.65
SNRNP200O75643 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
SNRNP200O75643 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP200O75643 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP200O75643 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SNRNP200O75643 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SNRNP200O75643 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP200O75643 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.12■□□□□ 0.65
SNRNP200O75643 AC133681.1-201ENST00000465482 601 ntBASIC19.12■□□□□ 0.65
SNRNP200O75643 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP200O75643 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP200O75643 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
SNRNP200O75643 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP200O75643 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.11■□□□□ 0.65
SNRNP200O75643 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SNRNP200O75643 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SNRNP200O75643 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRNP200O75643 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.11■□□□□ 0.65
SNRNP200O75643 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SNRNP200O75643 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRNP200O75643 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRNP200O75643 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRNP200O75643 KRT18P29-201ENST00000397031 1267 ntBASIC19.11■□□□□ 0.65
SNRNP200O75643 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.11■□□□□ 0.65
SNRNP200O75643 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SNRNP200O75643 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.11■□□□□ 0.65
SNRNP200O75643 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRNP200O75643 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.11■□□□□ 0.65
SNRNP200O75643 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNRNP200O75643 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRNP200O75643 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.1■□□□□ 0.65
SNRNP200O75643 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP200O75643 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP200O75643 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP200O75643 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP200O75643 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP200O75643 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP200O75643 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP200O75643 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP200O75643 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP200O75643 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.1■□□□□ 0.65
SNRNP200O75643 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP200O75643 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.1■□□□□ 0.65
SNRNP200O75643 RPPH1-201ENST00000516869 333 ntBASIC19.1■□□□□ 0.65
SNRNP200O75643 AL121829.2-201ENST00000620908 328 ntBASIC19.1■□□□□ 0.65
SNRNP200O75643 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP200O75643 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.1■□□□□ 0.65
SNRNP200O75643 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SNRNP200O75643 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SNRNP200O75643 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP200O75643 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SNRNP200O75643 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP200O75643 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP200O75643 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP200O75643 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.09■□□□□ 0.65
SNRNP200O75643 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP200O75643 AC018553.1-201ENST00000616682 1458 ntBASIC19.09■□□□□ 0.65
SNRNP200O75643 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.09■□□□□ 0.65
SNRNP200O75643 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP200O75643 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP200O75643 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP200O75643 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.09■□□□□ 0.65
SNRNP200O75643 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SNRNP200O75643 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms