Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 C9orf163-202ENST00000624034 2573 ntBASIC8.96□□□□□ -0.98
USH2AO75445 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC8.96□□□□□ -0.98
USH2AO75445 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
USH2AO75445 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC8.96□□□□□ -0.98
USH2AO75445 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC8.96□□□□□ -0.98
USH2AO75445 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC8.96□□□□□ -0.98
USH2AO75445 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
USH2AO75445 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
USH2AO75445 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
USH2AO75445 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
USH2AO75445 PRELID1P1-202ENST00000567272 903 ntBASIC8.96□□□□□ -0.98
USH2AO75445 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
USH2AO75445 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
USH2AO75445 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
USH2AO75445 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC8.96□□□□□ -0.98
USH2AO75445 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
USH2AO75445 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC8.96□□□□□ -0.98
USH2AO75445 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
USH2AO75445 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
USH2AO75445 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
USH2AO75445 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC8.96□□□□□ -0.98
USH2AO75445 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC8.95□□□□□ -0.98
USH2AO75445 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC8.95□□□□□ -0.98
USH2AO75445 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 AC004951.3-201ENST00000418645 1148 ntBASIC8.95□□□□□ -0.98
USH2AO75445 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC8.95□□□□□ -0.98
USH2AO75445 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC8.95□□□□□ -0.98
USH2AO75445 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC8.95□□□□□ -0.98
USH2AO75445 TSPY19P-201ENST00000418461 509 ntBASIC8.95□□□□□ -0.98
USH2AO75445 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 TSPY18P-201ENST00000441642 509 ntBASIC8.95□□□□□ -0.98
USH2AO75445 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC8.95□□□□□ -0.98
USH2AO75445 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC8.95□□□□□ -0.98
USH2AO75445 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC8.95□□□□□ -0.98
USH2AO75445 TBCB-205ENST00000585746 875 ntTSL 3 BASIC8.95□□□□□ -0.98
USH2AO75445 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
USH2AO75445 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC8.95□□□□□ -0.98
USH2AO75445 TERT-206ENST00000508104 2486 ntTSL 5 BASIC8.95□□□□□ -0.98
USH2AO75445 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
USH2AO75445 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
USH2AO75445 KSR1P1-201ENST00000446298 240 ntBASIC8.95□□□□□ -0.98
USH2AO75445 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC8.95□□□□□ -0.98
USH2AO75445 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC8.95□□□□□ -0.98
USH2AO75445 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC8.95□□□□□ -0.98
USH2AO75445 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 KRT8P8-201ENST00000434750 1448 ntBASIC8.95□□□□□ -0.98
USH2AO75445 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
USH2AO75445 DAP-202ENST00000432074 1048 ntTSL 2 BASIC8.95□□□□□ -0.98
USH2AO75445 AC120114.3-201ENST00000611923 658 ntBASIC8.95□□□□□ -0.98
USH2AO75445 AL031008.1-201ENST00000619963 541 ntBASIC8.95□□□□□ -0.98
USH2AO75445 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
USH2AO75445 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC8.94□□□□□ -0.98
USH2AO75445 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
USH2AO75445 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
USH2AO75445 AC079776.4-201ENST00000511039 504 ntBASIC8.94□□□□□ -0.98
USH2AO75445 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
USH2AO75445 PKM-204ENST00000449901 2526 ntTSL 2 BASIC8.94□□□□□ -0.98
USH2AO75445 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
USH2AO75445 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
USH2AO75445 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC8.94□□□□□ -0.98
USH2AO75445 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
USH2AO75445 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC8.94□□□□□ -0.98
USH2AO75445 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC8.94□□□□□ -0.98
USH2AO75445 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC8.94□□□□□ -0.98
USH2AO75445 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC8.94□□□□□ -0.98
USH2AO75445 AC116562.4-202ENST00000641738 218 ntBASIC8.94□□□□□ -0.98
USH2AO75445 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC8.94□□□□□ -0.98
USH2AO75445 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC8.94□□□□□ -0.98
USH2AO75445 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
USH2AO75445 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
USH2AO75445 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC8.94□□□□□ -0.98
USH2AO75445 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
USH2AO75445 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC8.94□□□□□ -0.98
USH2AO75445 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
USH2AO75445 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
USH2AO75445 MIR564-202ENST00000385049 94 ntBASIC8.94□□□□□ -0.98
USH2AO75445 MIR574-201ENST00000385209 96 ntBASIC8.94□□□□□ -0.98
USH2AO75445 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC8.94□□□□□ -0.98
USH2AO75445 PMS2P1-201ENST00000431037 1228 ntBASIC8.94□□□□□ -0.98
USH2AO75445 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC8.94□□□□□ -0.98
USH2AO75445 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
USH2AO75445 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
USH2AO75445 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
USH2AO75445 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC8.94□□□□□ -0.98
USH2AO75445 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
USH2AO75445 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
USH2AO75445 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms