Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.75■□□□□ 0.91
OPHN1O60890 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
OPHN1O60890 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
OPHN1O60890 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.75■□□□□ 0.91
OPHN1O60890 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.75■□□□□ 0.91
OPHN1O60890 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.75■□□□□ 0.91
OPHN1O60890 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
OPHN1O60890 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
OPHN1O60890 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
OPHN1O60890 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
OPHN1O60890 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.75■□□□□ 0.91
OPHN1O60890 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
OPHN1O60890 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
OPHN1O60890 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.75■□□□□ 0.91
OPHN1O60890 AC026366.1-201ENST00000488803 879 ntBASIC20.75■□□□□ 0.91
OPHN1O60890 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
OPHN1O60890 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.75■□□□□ 0.91
OPHN1O60890 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.75■□□□□ 0.91
OPHN1O60890 AC138932.1-201ENST00000534164 6830 ntBASIC20.75■□□□□ 0.91
OPHN1O60890 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
OPHN1O60890 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
OPHN1O60890 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
OPHN1O60890 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.75■□□□□ 0.91
OPHN1O60890 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
OPHN1O60890 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
OPHN1O60890 AC007952.6-201ENST00000573168 2673 ntBASIC20.75■□□□□ 0.91
OPHN1O60890 AC003957.1-201ENST00000625108 2673 ntBASIC20.75■□□□□ 0.91
OPHN1O60890 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
OPHN1O60890 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
OPHN1O60890 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
OPHN1O60890 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.75■□□□□ 0.91
OPHN1O60890 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
OPHN1O60890 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
OPHN1O60890 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.74■□□□□ 0.91
OPHN1O60890 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.74■□□□□ 0.91
OPHN1O60890 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
OPHN1O60890 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
OPHN1O60890 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.74■□□□□ 0.91
OPHN1O60890 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
OPHN1O60890 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
OPHN1O60890 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
OPHN1O60890 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
OPHN1O60890 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.74■□□□□ 0.91
OPHN1O60890 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
OPHN1O60890 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.74■□□□□ 0.91
OPHN1O60890 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.74■□□□□ 0.91
OPHN1O60890 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
OPHN1O60890 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
OPHN1O60890 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
OPHN1O60890 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
OPHN1O60890 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
OPHN1O60890 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
OPHN1O60890 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
OPHN1O60890 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
OPHN1O60890 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.73■□□□□ 0.91
OPHN1O60890 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
OPHN1O60890 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
OPHN1O60890 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
OPHN1O60890 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
OPHN1O60890 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
OPHN1O60890 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.73■□□□□ 0.91
OPHN1O60890 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.73■□□□□ 0.91
OPHN1O60890 AC099778.1-201ENST00000568593 1911 ntBASIC20.73■□□□□ 0.91
OPHN1O60890 AC087633.2-202ENST00000565166 1439 ntBASIC20.73■□□□□ 0.91
OPHN1O60890 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
OPHN1O60890 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
OPHN1O60890 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.73■□□□□ 0.91
OPHN1O60890 UNC93B5-201ENST00000530315 699 ntBASIC20.73■□□□□ 0.91
OPHN1O60890 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
OPHN1O60890 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.73■□□□□ 0.91
OPHN1O60890 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.73■□□□□ 0.91
OPHN1O60890 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
OPHN1O60890 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
OPHN1O60890 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
OPHN1O60890 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
OPHN1O60890 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPHN1O60890 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPHN1O60890 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.72■□□□□ 0.91
OPHN1O60890 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
OPHN1O60890 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPHN1O60890 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
OPHN1O60890 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
OPHN1O60890 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.72■□□□□ 0.91
OPHN1O60890 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
OPHN1O60890 AP003097.1-201ENST00000530657 1135 ntBASIC20.72■□□□□ 0.91
OPHN1O60890 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
OPHN1O60890 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPHN1O60890 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.72■□□□□ 0.91
OPHN1O60890 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPHN1O60890 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPHN1O60890 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPHN1O60890 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.72■□□□□ 0.91
OPHN1O60890 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPHN1O60890 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.72■□□□□ 0.91
OPHN1O60890 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPHN1O60890 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
OPHN1O60890 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
OPHN1O60890 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
OPHN1O60890 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
OPHN1O60890 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms