Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
RIPK2O43353 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK2O43353 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RIPK2O43353 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK2O43353 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK2O43353 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.25■□□□□ 0.83
RIPK2O43353 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.25■□□□□ 0.83
RIPK2O43353 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.25■□□□□ 0.83
RIPK2O43353 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RIPK2O43353 AC110285.6-201ENST00000617652 491 ntBASIC20.25■□□□□ 0.83
RIPK2O43353 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK2O43353 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK2O43353 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.25■□□□□ 0.83
RIPK2O43353 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK2O43353 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RIPK2O43353 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
RIPK2O43353 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RIPK2O43353 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RIPK2O43353 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.24■□□□□ 0.83
RIPK2O43353 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RIPK2O43353 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.24■□□□□ 0.83
RIPK2O43353 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.24■□□□□ 0.83
RIPK2O43353 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RIPK2O43353 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.24■□□□□ 0.83
RIPK2O43353 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.24■□□□□ 0.83
RIPK2O43353 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
RIPK2O43353 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.24■□□□□ 0.83
RIPK2O43353 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
RIPK2O43353 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.24■□□□□ 0.83
RIPK2O43353 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RIPK2O43353 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIPK2O43353 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RIPK2O43353 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIPK2O43353 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIPK2O43353 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIPK2O43353 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
RIPK2O43353 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RIPK2O43353 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIPK2O43353 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIPK2O43353 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.23■□□□□ 0.83
RIPK2O43353 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIPK2O43353 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.23■□□□□ 0.83
RIPK2O43353 AL356652.1-201ENST00000615962 565 ntBASIC20.23■□□□□ 0.83
RIPK2O43353 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.23■□□□□ 0.83
RIPK2O43353 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.23■□□□□ 0.83
RIPK2O43353 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIPK2O43353 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIPK2O43353 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.23■□□□□ 0.83
RIPK2O43353 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RIPK2O43353 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIPK2O43353 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIPK2O43353 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIPK2O43353 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.22■□□□□ 0.83
RIPK2O43353 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RIPK2O43353 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIPK2O43353 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RIPK2O43353 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RIPK2O43353 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIPK2O43353 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIPK2O43353 LINC01465-201ENST00000408887 1940 ntBASIC20.22■□□□□ 0.83
RIPK2O43353 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RIPK2O43353 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.22■□□□□ 0.83
RIPK2O43353 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.22■□□□□ 0.83
RIPK2O43353 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.22■□□□□ 0.83
RIPK2O43353 SUDS3P1-201ENST00000505831 966 ntBASIC20.22■□□□□ 0.83
RIPK2O43353 SLC7A5P1-201ENST00000568957 537 ntBASIC20.22■□□□□ 0.83
RIPK2O43353 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.22■□□□□ 0.83
RIPK2O43353 AC131212.1-201ENST00000613771 668 ntBASIC20.22■□□□□ 0.83
RIPK2O43353 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIPK2O43353 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIPK2O43353 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIPK2O43353 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIPK2O43353 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIPK2O43353 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.22■□□□□ 0.83
RIPK2O43353 AC008406.3-201ENST00000620001 1374 ntBASIC20.21■□□□□ 0.83
RIPK2O43353 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 AC087633.2-202ENST00000565166 1439 ntBASIC20.21■□□□□ 0.83
RIPK2O43353 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RIPK2O43353 PTBP1P-201ENST00000554374 1601 ntBASIC20.21■□□□□ 0.83
RIPK2O43353 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 PGM5P4-201ENST00000421970 445 ntBASIC20.21■□□□□ 0.83
RIPK2O43353 CDV3P1-201ENST00000471403 739 ntBASIC20.21■□□□□ 0.83
RIPK2O43353 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.21■□□□□ 0.83
RIPK2O43353 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.21■□□□□ 0.83
RIPK2O43353 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms