Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
HDAC3O15379 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.39■□□□□ 0.69
HDAC3O15379 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.39■□□□□ 0.69
HDAC3O15379 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.39■□□□□ 0.69
HDAC3O15379 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.39■□□□□ 0.69
HDAC3O15379 TERF1P2-201ENST00000583350 1212 ntBASIC19.39■□□□□ 0.69
HDAC3O15379 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.39■□□□□ 0.69
HDAC3O15379 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.39■□□□□ 0.69
HDAC3O15379 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC3O15379 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.39■□□□□ 0.69
HDAC3O15379 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HDAC3O15379 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.39■□□□□ 0.69
HDAC3O15379 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.38■□□□□ 0.69
HDAC3O15379 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.38■□□□□ 0.69
HDAC3O15379 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC3O15379 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
HDAC3O15379 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC3O15379 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC3O15379 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
HDAC3O15379 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HDAC3O15379 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HDAC3O15379 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.38■□□□□ 0.69
HDAC3O15379 AC123595.1-201ENST00000440769 1046 ntBASIC19.38■□□□□ 0.69
HDAC3O15379 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.38■□□□□ 0.69
HDAC3O15379 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.38■□□□□ 0.69
HDAC3O15379 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC3O15379 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
HDAC3O15379 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC3O15379 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HDAC3O15379 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC3O15379 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC3O15379 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC3O15379 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC3O15379 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC3O15379 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.37■□□□□ 0.69
HDAC3O15379 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC3O15379 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC3O15379 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HDAC3O15379 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC3O15379 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.37■□□□□ 0.69
HDAC3O15379 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC3O15379 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC3O15379 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.37■□□□□ 0.69
HDAC3O15379 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC3O15379 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.37■□□□□ 0.69
HDAC3O15379 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC3O15379 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
HDAC3O15379 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HDAC3O15379 AL139246.5-201ENST00000606645 996 ntBASIC19.37■□□□□ 0.69
HDAC3O15379 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.37■□□□□ 0.69
HDAC3O15379 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC3O15379 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.37■□□□□ 0.69
HDAC3O15379 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC3O15379 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC3O15379 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.36■□□□□ 0.69
HDAC3O15379 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC3O15379 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.36■□□□□ 0.69
HDAC3O15379 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC3O15379 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC3O15379 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC3O15379 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC3O15379 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC3O15379 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.36■□□□□ 0.69
HDAC3O15379 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.36■□□□□ 0.69
HDAC3O15379 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.36■□□□□ 0.69
HDAC3O15379 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HDAC3O15379 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC3O15379 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.36■□□□□ 0.69
HDAC3O15379 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC3O15379 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.36■□□□□ 0.69
HDAC3O15379 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC3O15379 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.36■□□□□ 0.69
HDAC3O15379 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.36■□□□□ 0.69
HDAC3O15379 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC3O15379 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC3O15379 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.36■□□□□ 0.69
HDAC3O15379 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.36■□□□□ 0.69
HDAC3O15379 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.36■□□□□ 0.69
HDAC3O15379 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.36■□□□□ 0.69
HDAC3O15379 PTBP1P-201ENST00000554374 1601 ntBASIC19.36■□□□□ 0.69
HDAC3O15379 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
HDAC3O15379 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HDAC3O15379 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC3O15379 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC3O15379 AC004854.2-201ENST00000608450 1441 ntBASIC19.35■□□□□ 0.69
HDAC3O15379 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms