Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
UBFD1O14562 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBFD1O14562 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBFD1O14562 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.35■□□□□ 0.69
UBFD1O14562 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.35■□□□□ 0.69
UBFD1O14562 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.35■□□□□ 0.69
UBFD1O14562 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
UBFD1O14562 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
UBFD1O14562 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBFD1O14562 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.35■□□□□ 0.69
UBFD1O14562 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
UBFD1O14562 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBFD1O14562 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
UBFD1O14562 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBFD1O14562 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBFD1O14562 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
UBFD1O14562 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBFD1O14562 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBFD1O14562 KRT18P68-201ENST00000392293 1000 ntBASIC19.34■□□□□ 0.69
UBFD1O14562 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
UBFD1O14562 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBFD1O14562 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBFD1O14562 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBFD1O14562 AL031963.3-201ENST00000606441 850 ntBASIC19.34■□□□□ 0.69
UBFD1O14562 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.34■□□□□ 0.69
UBFD1O14562 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBFD1O14562 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBFD1O14562 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBFD1O14562 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBFD1O14562 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
UBFD1O14562 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBFD1O14562 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBFD1O14562 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBFD1O14562 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.33■□□□□ 0.69
UBFD1O14562 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBFD1O14562 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBFD1O14562 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBFD1O14562 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
UBFD1O14562 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
UBFD1O14562 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.33■□□□□ 0.69
UBFD1O14562 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.33■□□□□ 0.68
UBFD1O14562 AC006015.1-201ENST00000429970 570 ntBASIC19.33■□□□□ 0.68
UBFD1O14562 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.33■□□□□ 0.68
UBFD1O14562 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
UBFD1O14562 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
UBFD1O14562 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBFD1O14562 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.33■□□□□ 0.68
UBFD1O14562 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
UBFD1O14562 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.33■□□□□ 0.68
UBFD1O14562 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBFD1O14562 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBFD1O14562 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBFD1O14562 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.33■□□□□ 0.68
UBFD1O14562 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBFD1O14562 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBFD1O14562 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UBFD1O14562 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBFD1O14562 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBFD1O14562 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.32■□□□□ 0.68
UBFD1O14562 AL355472.2-201ENST00000422958 438 ntBASIC19.32■□□□□ 0.68
UBFD1O14562 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.32■□□□□ 0.68
UBFD1O14562 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.32■□□□□ 0.68
UBFD1O14562 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.32■□□□□ 0.68
UBFD1O14562 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
UBFD1O14562 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBFD1O14562 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
UBFD1O14562 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBFD1O14562 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBFD1O14562 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.32■□□□□ 0.68
UBFD1O14562 KRT8P20-201ENST00000423953 1409 ntBASIC19.32■□□□□ 0.68
UBFD1O14562 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBFD1O14562 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.32■□□□□ 0.68
UBFD1O14562 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
UBFD1O14562 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UBFD1O14562 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBFD1O14562 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBFD1O14562 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBFD1O14562 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBFD1O14562 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBFD1O14562 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBFD1O14562 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBFD1O14562 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.31■□□□□ 0.68
UBFD1O14562 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBFD1O14562 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.31■□□□□ 0.68
UBFD1O14562 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
UBFD1O14562 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBFD1O14562 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBFD1O14562 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.31■□□□□ 0.68
UBFD1O14562 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBFD1O14562 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBFD1O14562 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBFD1O14562 AC026271.2-201ENST00000428091 497 ntBASIC19.31■□□□□ 0.68
UBFD1O14562 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.31■□□□□ 0.68
UBFD1O14562 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.31■□□□□ 0.68
UBFD1O14562 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.31■□□□□ 0.68
UBFD1O14562 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.31■□□□□ 0.68
UBFD1O14562 CYP2T3P-201ENST00000601990 817 ntBASIC19.31■□□□□ 0.68
UBFD1O14562 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBFD1O14562 KRT16P6-202ENST00000425692 1426 ntBASIC19.31■□□□□ 0.68
UBFD1O14562 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms