Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC7O00311 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC7O00311 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDC7O00311 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.57■□□□□ 0.72
CDC7O00311 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.57■□□□□ 0.72
CDC7O00311 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC7O00311 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC7O00311 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC7O00311 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC7O00311 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDC7O00311 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.56■□□□□ 0.72
CDC7O00311 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC7O00311 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC7O00311 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.56■□□□□ 0.72
CDC7O00311 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CDC7O00311 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC7O00311 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.56■□□□□ 0.72
CDC7O00311 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC7O00311 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CDC7O00311 BX276092.2-201ENST00000417668 665 ntBASIC19.56■□□□□ 0.72
CDC7O00311 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.56■□□□□ 0.72
CDC7O00311 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.56■□□□□ 0.72
CDC7O00311 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC7O00311 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDC7O00311 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC7O00311 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDC7O00311 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDC7O00311 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC7O00311 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.55■□□□□ 0.72
CDC7O00311 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDC7O00311 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC7O00311 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC7O00311 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.55■□□□□ 0.72
CDC7O00311 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC7O00311 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.55■□□□□ 0.72
CDC7O00311 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDC7O00311 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC7O00311 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC7O00311 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.55■□□□□ 0.72
CDC7O00311 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.55■□□□□ 0.72
CDC7O00311 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDC7O00311 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDC7O00311 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.54■□□□□ 0.72
CDC7O00311 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.54■□□□□ 0.72
CDC7O00311 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CDC7O00311 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 KRT16P6-202ENST00000425692 1426 ntBASIC19.54■□□□□ 0.72
CDC7O00311 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.54■□□□□ 0.72
CDC7O00311 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.54■□□□□ 0.72
CDC7O00311 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDC7O00311 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.54■□□□□ 0.72
CDC7O00311 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.54■□□□□ 0.72
CDC7O00311 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC7O00311 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.53■□□□□ 0.72
CDC7O00311 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC7O00311 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC7O00311 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.53■□□□□ 0.72
CDC7O00311 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDC7O00311 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC7O00311 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.53■□□□□ 0.72
CDC7O00311 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC7O00311 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDC7O00311 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC7O00311 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDC7O00311 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.53■□□□□ 0.72
CDC7O00311 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.53■□□□□ 0.72
CDC7O00311 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.53■□□□□ 0.72
CDC7O00311 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC7O00311 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.53■□□□□ 0.72
CDC7O00311 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC7O00311 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC7O00311 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDC7O00311 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.52■□□□□ 0.72
CDC7O00311 AC007952.6-201ENST00000573168 2673 ntBASIC19.52■□□□□ 0.72
CDC7O00311 AC003957.1-201ENST00000625108 2673 ntBASIC19.52■□□□□ 0.72
CDC7O00311 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC7O00311 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC7O00311 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDC7O00311 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDC7O00311 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CDC7O00311 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDC7O00311 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC7O00311 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC7O00311 HLA-G-202ENST00000376815 851 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms